RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF701Q9NV72 531 aaPredicted RBP11.08□□□□□ -0.64
USP11-208ENST00000480104 CIDEBQ9UHD4 219 aa11.08□□□□□ -0.64
USP11-208ENST00000480104 PKP3Q9Y446 797 aa11.08□□□□□ -0.64
USP11-208ENST00000480104 A0A0G2JMM0 328 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 A0A1W2PPB8 328 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 A0A1W2PRS3 328 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 KIR3DP1A8MWS1 328 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 CASKO14936 926 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 FOXS1O43638 330 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 AP2A1O95782 977 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 S1PR4O95977 384 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 CYC1P08574 325 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 ATP1B2P14415 290 aaPredicted RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 GABRA1P14867 456 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 SLC26A5P58743 744 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 USP10Q14694 798 aaKnown RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 SF1Q15637 639 aaKnown RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 FAM174BQ3ZCQ3 159 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 SFT2D3Q587I9 215 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 CCDC122Q5T0U0 273 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 RNF44Q7L0R7 432 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 GLT6D1Q7Z4J2 308 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 MAATS1Q7Z4T9 603 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 IGFBPL1Q8WX77 278 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 ISL2Q96A47 359 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 SLC22A18Q96BI1 424 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 ZMYND19Q96E35 227 aaPredicted RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 CAPZA3Q96KX2 299 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 IL17FQ96PD4 163 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 ASB8Q9H765 288 aa11.07□□□□□ -0.64
USP11-208ENST00000480104 ZNF629Q9UEG4 869 aaPredicted RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 RUVBL1Q9Y265 456 aaKnown RBP11.07□□□□□ -0.64
USP11-208ENST00000480104 TMEM191CA6NGB0 347 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 DEFB108AA8MXU0 73 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 KDM4EB2RXH2 506 aaPredicted RBP11.06□□□□□ -0.64
USP11-208ENST00000480104 TARM1B6A8C7 271 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 BIN1O00499 593 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 PGRP06401 933 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 CELA3AP09093 270 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 RARAP10276 462 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
USP11-208ENST00000480104 AGTR2P50052 363 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 ZNF136P52737 540 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 EMP3P54852 163 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 IFI35P80217 286 aaPredicted RBP11.06□□□□□ -0.64
USP11-208ENST00000480104 PAFAH1B3Q15102 231 aaKnown RBP11.06□□□□□ -0.64
USP11-208ENST00000480104 HKDC1Q2TB90 917 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 SLC22A16Q86VW1 577 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 CCNYQ8ND76 341 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 BLOC1S5Q8TDH9 187 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 ELP5Q8TE02 316 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 ZUFSPQ96AP4 578 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 SARAFQ96BY9 339 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 LPAR4Q99677 370 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 PIGQQ9BRB3 760 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 TTTY12Q9BZ98 90 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 DRC3Q9H069 523 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 NDST4Q9H3R1 872 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 VPS37BQ9H9H4 285 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
USP11-208ENST00000480104 CFAP99D6REC4 459 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 H0YGG7 62 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 FCHO1O14526 889 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 KDM1AO60341 852 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 SRP72O76094 671 aaKnown RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 TUBB4AP04350 444 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 CD48P09326 243 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 ENDOUP21128 410 aaKnown RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 PSMB5P28074 263 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 PCK1P35558 622 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 MAGEA5P43359 124 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 MAN2A2P49641 1150 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 AGFG1P52594 562 aaKnown RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 ARF3P61204 181 aaPredicted RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 GBE1Q04446 702 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 BOLA3Q53S33 107 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 CCDC183Q5T5S1 534 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 ABHD13Q7L211 337 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 ARHGEF39Q8N4T4 335 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 CSNK1A1LQ8N752 337 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 OR2M7Q8NG81 312 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 COPS8Q99627 209 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 MIPEPQ99797 713 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 SLC25A51Q9H1U9 297 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 GANQ9H2C0 597 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 SYNPO2LQ9H987 977 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 UBP1Q9NZI7 540 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 SPRR3Q9UBC9 169 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 LPAR3Q9UBY5 353 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 CRLS1Q9UJA2 301 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 DRG1Q9Y295 367 aaKnown RBP11.05□□□□□ -0.64
USP11-208ENST00000480104 TESMINQ9Y4I5 508 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 DUSP10Q9Y6W6 482 aa11.05□□□□□ -0.64
USP11-208ENST00000480104 STX7O15400 261 aaKnown RBP11.04□□□□□ -0.64
USP11-208ENST00000480104 GLSO94925 669 aaPredicted RBP11.04□□□□□ -0.64
USP11-208ENST00000480104 CD9P21926 228 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 CYLC1P35663 651 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms