RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ZGLP1P0C6A0 271 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ACPPP15309 386 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 PGAM1P18669 254 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 EMP3P54852 163 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ABATP80404 500 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 CAV1Q03135 178 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 TAP2Q03519 686 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 DSG2Q14126 1118 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 HKDC1Q2TB90 917 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 THEMIS2Q5TEJ8 643 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 AGAP7PQ5VUJ5 663 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ZNF425Q6IV72 752 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 Q6ZS92 163 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 UBE2R2Q712K3 238 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 KCNMB4Q86W47 210 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 PARP9Q8IXQ6 854 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 OR11G2Q8NGC1 345 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 SSC4DQ8WTU2 575 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ASB11Q8WXH4 323 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 MVB12AQ96EY5 273 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 SNF8Q96H20 258 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 AGAP4Q96P64 663 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 FMO2Q99518 471 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 LHPPQ9H008 270 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 IARS2Q9NSE4 1012 aaKnown RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ZDHHC18Q9NUE0 388 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 MTRF1LQ9UGC7 380 aaKnown RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 CDC14AQ9UNH5 594 aa13.65□□□□□ -0.22
ATG4B-218ENST00000479554 RUVBL1Q9Y265 456 aaKnown RBP13.65□□□□□ -0.22
ATG4B-218ENST00000479554 GFYI3L273 518 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 EIF3FO00303 357 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 HAUS5O94927 633 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 HPP00738 406 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 FAM153BP0C7A2 387 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 SKIV2L2P42285 1042 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 GLRBP48167 497 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 CRYMQ14894 314 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 NR6A1Q15406 480 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 HIF1AQ16665 826 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 FAM153CQ494X1 144 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 RNASEH2BQ5TBB1 312 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 GARNL3Q5VVW2 1013 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 ZDHHC24Q6UX98 284 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 CYHR1Q6ZMK1 362 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 PIWIL4Q7Z3Z4 852 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 CUZD1Q86UP6 607 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 GABPB2Q8TAK5 448 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 THOC3Q96J01 351 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 OR2A5Q96R48 311 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 EBNA1BP2Q99848 306 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 YIPF2Q9BWQ6 316 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 EPS8L2Q9H6S3 715 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 SYNPO2LQ9H987 977 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 C14orf105Q9NVL8 296 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 TRPC4Q9UBN4 977 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 PCDHGA10Q9Y5H3 936 aa13.64□□□□□ -0.23
ATG4B-218ENST00000479554 COPG1Q9Y678 874 aaKnown RBP13.64□□□□□ -0.23
ATG4B-218ENST00000479554 SPTAN1Q13813 2472 aaKnown RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 IGLV3-12A0A075B6K2 115 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 TXNDC9O14530 226 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 HAT1O14929 419 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 SEMA7AO75326 666 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 ANXA5P08758 320 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 IMPA1P29218 277 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 PLTPP55058 493 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 EIF2S3LQ2VIR3 472 aaKnown RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 VWA2Q5GFL6 755 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 UGT3A1Q6NUS8 523 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 IGFL2Q6UWQ7 119 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 C2CD4AQ8NCU7 369 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 PRR7Q8TB68 274 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 C8orf44Q96CB5 159 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 MMABQ96EY8 250 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 NDNQ99608 321 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 MESP1Q9BRJ9 268 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 DRC3Q9H069 523 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 ZNF160Q9HCG1 818 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 CCDC177Q9NQR7 707 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 CUEDC1Q9NWM3 386 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 NOVA2Q9UNW9 492 aaKnown RBP13.63□□□□□ -0.23
ATG4B-218ENST00000479554 CSAG2Q9Y5P2 127 aa13.63□□□□□ -0.23
ATG4B-218ENST00000479554 A0A0A6YYC8 382 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-218ENST00000479554 I3L1I5 382 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-218ENST00000479554 FFAR3O14843 346 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 GPR42O15529 346 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms