RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KCNE1BA0A087WTH5 132 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 HAT1O14929 419 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 ATXN7O15265 892 aaPredicted RBP25.62■■□□□ 1.69
CCM2-211ENST00000478582 GNAZP19086 355 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 CDC16Q13042 620 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 FBXO48Q5FWF7 155 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 FRMPD2BQ6IN97 320 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 NXPE4Q6UWF7 544 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 TRABD2AQ86V40 505 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 NKD1Q969G9 470 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 THAP11Q96EK4 314 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 CPSF2Q9P2I0 782 aaKnown RBP25.62■■□□□ 1.69
CCM2-211ENST00000478582 ASB1Q9Y576 335 aa25.62■■□□□ 1.69
CCM2-211ENST00000478582 TNPO3Q9Y5L0 923 aaKnown RBP25.62■■□□□ 1.69
CCM2-211ENST00000478582 LOC105369274A0A096LPK9 316 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 LOC102723532A0A0G2JNH3 316 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 TK2O00142 265 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 CPNE3O75131 537 aaKnown RBP25.61■■□□□ 1.69
CCM2-211ENST00000478582 SMIM24O75264 130 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 GLRA3O75311 464 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 CTSBP07858 339 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 HBQ1P09105 142 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 KRT4P19013 534 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 CRHR1P34998 444 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 GCGRP47871 477 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 CCT5P48643 541 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 AGTR2P50052 363 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 ATP1A2P50993 1020 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 RPS15AP62244 130 aaKnown RBP25.61■■□□□ 1.69
CCM2-211ENST00000478582 SRSF6Q13247 344 aaKnown RBP25.61■■□□□ 1.69
CCM2-211ENST00000478582 PCBP2Q15366 365 aaKnown RBP eCLIP25.61■■□□□ 1.698e-6■■■■□ 24
CCM2-211ENST00000478582 CATSPEREQ5SY80 951 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 LRIG3Q6UXM1 1119 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 TIPARPQ7Z3E1 657 aaKnown RBP25.61■■□□□ 1.69
CCM2-211ENST00000478582 CROCCP2Q86T23 111 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 OR4N4Q8N0Y3 316 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 LRFN5Q96NI6 719 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 ZIM3Q96PE6 472 aa25.61■■□□□ 1.69
CCM2-211ENST00000478582 FITM1A5D6W6 292 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 STX16-NPEPL1H3BU86 382 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 K7EPI3 171 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 ERVH48-1M5A8F1 160 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 STX16O14662 325 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 ZSCAN9O15535 394 aaPredicted RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 ZNF749O43361 778 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 CCNT2O60583 730 aaKnown RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 GRK3P35626 688 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 PCDH1Q08174 1060 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 PDK4Q16654 411 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 PRAMEF17Q5VTA0 474 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 YOD1Q5VVQ6 348 aaPredicted RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 C6orf15Q6UXA7 325 aaPredicted RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 SLCO4C1Q6ZQN7 724 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 VASH2Q86V25 355 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 NLGN4XQ8N0W4 816 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 NLGN4YQ8NFZ3 816 aaPredicted RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 EHD1Q9H4M9 534 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 SYNPO2LQ9H987 977 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 ACTR5Q9H9F9 607 aaPredicted RBP25.6■■□□□ 1.69
CCM2-211ENST00000478582 OPTCQ9UBM4 332 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 GRID1Q9ULK0 1009 aa25.6■■□□□ 1.69
CCM2-211ENST00000478582 LOC400499M0QZD8 3231 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 H0YGG7 62 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 RAD1O60671 282 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 NTRK1P04629 796 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 C1GALT1C1LP0DN25 315 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 VSX2P58304 361 aaPredicted RBP25.59■■□□□ 1.69
CCM2-211ENST00000478582 ARF3P61204 181 aaPredicted RBP25.59■■□□□ 1.69
CCM2-211ENST00000478582 GRM7Q14831 915 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 KRT71Q3SY84 523 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 WASHC2DQ5SRD0 308 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 ATG9BQ674R7 924 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 C16orf46Q6P387 395 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 PLD3Q8IV08 490 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 ESX1Q8N693 406 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 PTGR2Q8N8N7 351 aaPredicted RBP25.59■■□□□ 1.69
CCM2-211ENST00000478582 SLC38A9Q8NBW4 561 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 MKS1Q9NXB0 559 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 SRPK3Q9UPE1 567 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 HEATR5BQ9P2D3 2071 aa25.59■■□□□ 1.69
CCM2-211ENST00000478582 MGAQ8IWI9 3026 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 TRBC2A0A5B9 178 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 EIF4E1BA6NMX2 242 aaKnown RBP25.58■■□□□ 1.69
CCM2-211ENST00000478582 CLGNO14967 610 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 EPORP19235 508 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 EMP3P54852 163 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 E2F2Q14209 437 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 PRTGQ2VWP7 1150 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 RHBDD2Q6NTF9 364 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 TMPRSS11BQ86T26 416 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 CACNA2D3Q8IZS8 1091 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 ZNF655Q8N720 491 aaPredicted RBP25.58■■□□□ 1.69
CCM2-211ENST00000478582 SNX31Q8N9S9 440 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 GALNT6Q8NCL4 622 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 SLC39A7Q92504 469 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 WDR34Q96EX3 536 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 WBP1Q96G27 269 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 EMCNQ9ULC0 261 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 PCDHGA4Q9Y5G9 962 aa25.58■■□□□ 1.69
CCM2-211ENST00000478582 TXNDC9O14530 226 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms