RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NUDT4Q9NZJ9 180 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 CPSF2Q9P2I0 782 aaKnown RBP6.6□□□□□ -1.35
BRCA1-215ENST00000478531 IL17BQ9UHF5 180 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 PADI1Q9ULC6 663 aa6.6□□□□□ -1.35
BRCA1-215ENST00000478531 SPTA1P02549 2419 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 FOXO6A8MYZ6 492 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 TK2O00142 265 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 MEN1O00255 615 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 TAPBPO15533 448 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 P2RX6O15547 441 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 KLK3P07288 261 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-215ENST00000478531 HBQ1P09105 142 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 PRKAR1AP10644 381 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 KRT15P19012 456 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-215ENST00000478531 GRK3P35626 688 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 SLC6A12P48065 614 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 AGTR2P50052 363 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CCR8P51685 355 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 UCNP55089 124 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 RPS15AP62244 130 aaKnown RBP6.59□□□□□ -1.35
BRCA1-215ENST00000478531 RPS18P62269 152 aaKnown RBP6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CSNK1G2P78368 415 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 IFFO1Q0D2I5 559 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CDC16Q13042 620 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 MAP7Q14244 749 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 GRM7Q14831 915 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 ACAP2Q15057 778 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 HKDC1Q2TB90 917 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 TECRLQ5HYJ1 363 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 SULT1C3Q6IMI6 304 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 LCN10Q6JVE6 187 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 FBXO42Q6P3S6 717 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 DSELQ8IZU8 1212 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 TCAIMQ8N3R3 496 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 DTWD1Q8N5C7 304 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CSNK1A1LQ8N752 337 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CABS1Q96KC9 395 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 ATOH8Q96SQ7 321 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 RUFY1Q96T51 708 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 MACROD1Q9BQ69 325 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CHST8Q9H2A9 424 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 OCEL1Q9H607 264 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 PRM3Q9NNZ6 103 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 CUTCQ9NTM9 273 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 TMEM184CQ9NVA4 438 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 XPR1Q9UBH6 696 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 FETUBQ9UGM5 382 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 SRPK3Q9UPE1 567 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 ASB1Q9Y576 335 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 PCDHGA4Q9Y5G9 962 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 AP1M2Q9Y6Q5 423 aa6.59□□□□□ -1.35
BRCA1-215ENST00000478531 A0A1B0GX78 115 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 TLDC2A0PJX2 215 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 HYKKA2RU49 373 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 C9J4A7 227 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CLGNO14967 610 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 EFSO43281 561 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 OR1F1O43749 312 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RFPL1O75677 317 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 STK16O75716 305 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 IPO13O94829 963 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 SERPIND1P05546 499 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 AGXTP21549 392 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 F8A1P23610 371 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 HRH2P25021 359 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RORAP35398 523 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 BCL6P41182 706 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CYP4F2P78329 520 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 NFKB2Q00653 900 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 DNASE1L3Q13609 305 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 PDK4Q16654 411 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 FAM69BQ5VUD6 431 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RHBDD2Q6NTF9 364 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ENDOVQ8N8Q3 282 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZSCAN1Q8NBB4 408 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF740Q8NDX6 193 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RHEBL1Q8TAI7 183 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZCCHC10Q8TBK6 192 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 STARD8Q92502 1023 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 CAVIN3Q969G5 261 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ZBTB9Q96C00 473 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 GPR78Q96P69 363 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 OR2A5Q96R48 311 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 SPNS1Q9H2V7 528 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 ACTL8Q9H568 366 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 DNAJC11Q9NVH1 559 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 METRNQ9UJH8 293 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 KCNE2Q9Y6J6 123 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 MAU2Q9Y6X3 613 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 A0A1W2PPM1 405 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 LRRC14BA6NHZ5 514 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 DSCR3O14972 297 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 NDUFS4O43181 175 aa6.58□□□□□ -1.36
BRCA1-215ENST00000478531 LCMT2O60294 686 aaKnown RBP6.58□□□□□ -1.36
BRCA1-215ENST00000478531 SRPX2O60687 465 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms