RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 BCHEP06276 602 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ATP4BP51164 291 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 RAPSNQ13702 412 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 KCNC3Q14003 757 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 SMARCD3Q6STE5 483 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 CXXC5Q7LFL8 322 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 PIANPQ8IYJ0 282 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 MAPK15Q8TD08 544 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 FUBP1Q96AE4 644 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 CMTM6Q9NX76 183 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 GPN3Q9UHW5 284 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 IRGMA1A4Y4 181 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 OR5F1O95221 314 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ADH1BP00325 375 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 TNFP01375 233 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ALPPP05187 535 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 BCKDHAP12694 445 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 CRTC1Q6UUV9 634 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 S100ZQ8WXG8 99 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 FCRL4Q96PJ5 515 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 S100A13Q99584 98 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 C17orf62Q9BQA9 187 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 TRBC2A0A5B9 178 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 G3V2L1 256 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 DNAJA1P31689 397 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 IGFALSP35858 605 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 ARCN1P48444 511 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 EIF2B2P49770 351 aaKnown RBP13.78□□□□□ -0.2
NPHP4-208ENST00000478423 CRB2Q5IJ48 1285 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 NRSN1Q8IZ57 195 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 EVPLQ92817 2033 aa13.78□□□□□ -0.2
NPHP4-208ENST00000478423 CPSF4LA6NMK7 179 aaKnown RBP13.77□□□□□ -0.2
NPHP4-208ENST00000478423 TMEM150CB9EJG8 249 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 CHRM5P08912 532 aaPredicted RBP13.77□□□□□ -0.2
NPHP4-208ENST00000478423 TYRP1P17643 537 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 RUNX3Q13761 415 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 GPR68Q15743 365 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 ZSWIM7Q19AV6 140 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 TMPRSS11AQ6ZMR5 421 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 IL17FQ96PD4 163 aa13.77□□□□□ -0.2
NPHP4-208ENST00000478423 A0A1W2PQU0 124 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 DRGXA6NNA5 263 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 WASH4PA8MWX3 477 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 PSMD11O00231 422 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 PGRMC2O15173 223 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 DFNA5O60443 496 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 MPZL2O60487 215 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 C6orf47O95873 294 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 NPPAP01160 153 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 SRP54P61011 504 aaKnown RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 DSC1Q08554 894 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 ABRAXAS2Q15018 415 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 TAZQ16635 292 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 KLHL17Q6TDP4 642 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 PMEPA1Q969W9 287 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 NEUROD4Q9HD90 331 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 THUMPD1Q9NXG2 353 aaKnown RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 GLOD5A6NK44 160 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 HAT1O14929 419 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 ITGBL1O95965 494 aaPredicted RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 C8orf89P0DMQ9 161 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 CCT3P49368 545 aaKnown RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 CDH15P55291 814 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 CEACAM7Q14002 265 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 LASP1Q14847 261 aaKnown RBP13.77□□□□□ -0.21
NPHP4-208ENST00000478423 TAB1Q15750 504 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 NDUFAF6Q330K2 333 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 LIPJQ5W064 366 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 FAM91A1Q658Y4 838 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 KLHDC9Q8NEP7 349 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 ATP6V1C2Q8NEY4 427 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 MEAF6Q9HAF1 191 aa13.77□□□□□ -0.21
NPHP4-208ENST00000478423 IGLON5A6NGN9 336 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 TSC22D2O75157 780 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 ALOX5P09917 674 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 C1GALT1C1LP0DN25 315 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 C6P13671 934 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 RCVRNP35243 200 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 GRIA2P42262 883 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 ZNF311Q5JNZ3 666 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 DENND5AQ6IQ26 1287 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
NPHP4-208ENST00000478423 IQCHQ86VS3 1027 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms