RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 KINO60870 393 aaKnown RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 KHDRBS3O75525 346 aaKnown RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 GAS8-AS1O95177 125 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 FDPSP14324 419 aaKnown RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 HSD17B3P37058 310 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 DLK1P80370 383 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 MZT1Q08AG7 82 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 TMEM187Q14656 261 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 LASP1Q14847 261 aaKnown RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 TAF7Q15545 349 aaPredicted RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 SGSM1Q2NKQ1 1148 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 MPP7Q5T2T1 576 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 UGT3A1Q6NUS8 523 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 SUSD1Q6UWL2 747 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 TMEM207Q6UWW9 146 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 PPP1R21Q6ZMI0 780 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 Q6ZSR9 355 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 METTL23Q86XA0 190 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 LACC1Q8IV20 430 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 OTUD6BQ8N6M0 293 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 IQUBQ8NA54 791 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF540Q8NDQ6 660 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 GPRC5AQ8NFJ5 357 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 OR5AP2Q8NGF4 316 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 OR10Q1Q8NGQ4 319 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 ARHGAP45Q92619 1136 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 WBP2Q969T9 261 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 SIPA1Q96FS4 1042 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 FER1L6-AS2Q96M78 137 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 AK8Q96MA6 479 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 GBP5Q96PP8 586 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 RAB3IPQ96QF0 476 aaPredicted RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 ATP6V0BQ99437 205 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 MMADHCQ9H3L0 296 aaPredicted RBP3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 FZD8Q9H461 694 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 FN3KQ9H479 309 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 CACNG5Q9UF02 275 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 SH3BGRL2Q9UJC5 107 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 CHKBQ9Y259 395 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 WDR37Q9Y2I8 494 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 LIPGQ9Y5X9 500 aa3.46□□□□□ -1.86
SMARCA1-204ENST00000478420 CASTOR2A6NHX0 329 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 PSMA7O14818 248 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ZBTB14O43829 449 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF821O75541 412 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ATP6AP2O75787 350 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 STAM2O75886 525 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 GSRP00390 522 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 PENKP01210 267 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 GP1BBP13224 206 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 LHCGRP22888 699 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 PTAFRP25105 342 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 CDC25CP30307 473 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 SLC12A3P55017 1021 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 YWHAHQ04917 246 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 TRAP1Q12931 704 aaKnown RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF273Q14593 569 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ENPP7Q6UWV6 458 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 C11orf57Q6ZUT1 292 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ANKRD13CQ8N6S4 541 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 OR10G8Q8NGN5 311 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ZNF606Q8WXB4 792 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 RUNDC3BQ96NL0 473 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 CCDC3Q9BQI4 270 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 GTPBP2Q9BX10 602 aaKnown RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 FUT8Q9BYC5 575 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 FAM129AQ9BZQ8 928 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 TNMDQ9H2S6 317 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 THAP9Q9H5L6 903 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 LIN28AQ9H9Z2 209 aaKnown RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 PLCXD1Q9NUJ7 323 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 RNF186Q9NXI6 227 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 KLHL8Q9P2G9 620 aaPredicted RBP3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 POLLQ9UGP5 575 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 R4GN57 208 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 ATAD2BQ9ULI0 1458 aa3.45□□□□□ -1.86
SMARCA1-204ENST00000478420 A4D1N5 150 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 CCDC188H7C350 402 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 NDC80O14777 642 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 SEC22BO75396 215 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 SLC2A2P11168 524 aaPredicted RBP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 ACAT1P24752 427 aaKnown RBP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 CD27P26842 260 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 MAPK3P27361 379 aaPredicted RBP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 LBX1P52954 281 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 CLDN15P56746 228 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 MYL7Q01449 175 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 KLHL30Q0D2K2 578 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 TRIM29Q14134 588 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 NONOQ15233 471 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 C2orf76Q3KRA6 126 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 ANKDD1AQ495B1 522 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 ZC2HC1BQ5TFG8 222 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 SLC25A47Q6Q0C1 308 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 PET117Q6UWS5 81 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 CCAR2Q8N163 923 aaKnown RBP3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 DCLK2Q8N568 766 aa3.44□□□□□ -1.86
SMARCA1-204ENST00000478420 C10orf53Q8N6V4 93 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms