RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MEF2AQ02078 507 aaPredicted RBP14.69□□□□□ -0.06
SEC13-215ENST00000477547 IRF8Q02556 426 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 CYP4F3Q08477 520 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 TARDBPQ13148 414 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC13-215ENST00000477547 TUBB3Q13509 450 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 SLBPQ14493 270 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC13-215ENST00000477547 XKR6Q5GH73 641 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 C3orf38Q5JPI3 329 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 NXPE4Q6UWF7 544 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 SLCO4C1Q6ZQN7 724 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 RNF44Q7L0R7 432 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 TMPRSS7Q7RTY8 843 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 MYLK4Q86YV6 388 aaPredicted RBP14.69□□□□□ -0.06
SEC13-215ENST00000477547 CACTIN-AS1Q8N1I8 211 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 D2HGDHQ8N465 521 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 ZUFSPQ96AP4 578 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 GRAMD1AQ96CP6 724 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 CRELD1Q96HD1 420 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 SPNS1Q9H2V7 528 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 GSTO2Q9H4Y5 243 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 NOL11Q9H8H0 719 aaKnown RBP14.69□□□□□ -0.06
SEC13-215ENST00000477547 IPPKQ9H8X2 491 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 ACTR8Q9H981 624 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 FANCEQ9HB96 536 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 ZBTB26Q9HCK0 441 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 FAM60AQ9NP50 221 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 TMEM184CQ9NVA4 438 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 FER1L5A0AVI2 2057 aa14.69□□□□□ -0.06
SEC13-215ENST00000477547 WDR91A4D1P6 747 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 H3BQF6 201 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 CTSVO60911 334 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 PRB1P04280 392 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 C1GALT1C1LP0DN25 315 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 FGF3P11487 239 aaPredicted RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 HGFP14210 728 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 TSPAN8P19075 237 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 GRK3P35626 688 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 CCNG1P51959 295 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 WDR4P57081 412 aaKnown RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 NAA20P61599 178 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 CLCQ05315 142 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 TRAF3Q13114 568 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 CHIT1Q13231 466 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 EIF3IQ13347 325 aaKnown RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 GPR19Q15760 415 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 ATG9BQ674R7 924 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 ZCCHC23Q6ZST2 131 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 FRMD7Q6ZUT3 714 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 RAB11FIP2Q7L804 512 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 MARCH9Q86YJ5 346 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 PLD3Q8IV08 490 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 NUDCD3Q8IVD9 361 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 OR52B6Q8NGF0 335 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 WDR36Q8NI36 951 aaKnown RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 PPP1R14CQ8TAE6 165 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 N4BP2L2Q92802 583 aaPredicted RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 ATP6V1E2Q96A05 226 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 MOCOSQ96EN8 888 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 PTCD3Q96EY7 689 aaKnown RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 ZFYVE21Q9BQ24 234 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 AIF1LQ9BQI0 150 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 EFCAB11Q9BUY7 163 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 GATA5Q9BWX5 397 aaPredicted RBP14.68□□□□□ -0.06
SEC13-215ENST00000477547 CHRNA10Q9GZZ6 450 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 EHD1Q9H4M9 534 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 STK38LQ9Y2H1 464 aa14.68□□□□□ -0.06
SEC13-215ENST00000477547 A0A0J9YVX5 310 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FEZF1A0PJY2 475 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 PMS2P1A4D2B8 440 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 TMEM150CB9EJG8 249 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 OR7A17O14581 309 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 PLD2O14939 933 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 BIRC5O15392 142 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 PRAMEF4O60810 478 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 H2AFYO75367 372 aaKnown RBP14.67□□□□□ -0.06
SEC13-215ENST00000477547 MLYCDO95822 493 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 OTCP00480 354 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 JMJD7P0C870 316 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 NEFHP12036 1026 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FOLR1P15328 257 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 ITIH1P19827 911 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 CD22P20273 847 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 ACY1Q03154 408 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FOXM1Q08050 763 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 LCP2Q13094 533 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 DOC2AQ14183 400 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 CHI3L2Q15782 390 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 ZC3H12BQ5HYM0 836 aaKnown RBP14.67□□□□□ -0.06
SEC13-215ENST00000477547 PAGE2BQ5JRK9 111 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 PRAMEF9Q5VWM5 478 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 GRHL2Q6ISB3 625 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 CYB5D1Q6P9G0 228 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FOXR1Q6PIV2 292 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 TBC1D19Q8N5T2 526 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 TRPC4APQ8TEL6 797 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 WDR34Q96EX3 536 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FCRL4Q96PJ5 515 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 ZNF382Q96SR6 550 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 FGF21Q9NSA1 209 aa14.67□□□□□ -0.06
SEC13-215ENST00000477547 GEMIN8Q9NWZ8 242 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms