RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PGBD2Q6P3X8 592 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ERICH5Q6P6B1 374 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 METAP1DQ6UB28 335 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 MOB3CQ70IA8 216 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PRSS45Q7RTY3 260 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 NOTCH2NLQ7Z3S9 236 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ADCK1Q86TW2 530 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 KBTBD6Q86V97 674 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 VPS36Q86VN1 386 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 STX12Q86Y82 276 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PHC2Q8IXK0 858 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PYROXD2Q8N2H3 581 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ZCCHC7Q8N3Z6 543 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 LIX1Q8N485 282 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CCDC63Q8NA47 563 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ATG16L2Q8NAA4 619 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TRPV1Q8NER1 839 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 OR52M1Q8NGK5 317 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 FIBINQ8TAL6 211 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 RAB3IL1Q8TBN0 382 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TEX47Q8TBZ9 253 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 URGCPQ8TCY9 931 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 MAGEC3Q8TD91 643 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 LIPHQ8WWY8 451 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ATL1Q8WXF7 558 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 IFT81Q8WYA0 676 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TM9SF4Q92544 642 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SEPT8Q92599 483 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 STAMQ92783 540 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 EID2BQ96D98 161 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 MRPL38Q96DV4 380 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 TMEM41AQ96HV5 264 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 METTL2AQ96IZ6 378 aaKnown RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 FAM71F1Q96KD3 344 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 LINC00479Q96M42 142 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CCDC42Q96M95 316 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ZNF570Q96NI8 536 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CDRT15Q96T59 188 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 EDEM2Q9BV94 578 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 FAM107BQ9H098 131 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 GBA3Q9H227 469 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SLC26A1Q9H2B4 701 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SLC32A1Q9H598 525 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TAF1DQ9H5J8 278 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 ATP13A3Q9H7F0 1226 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ERVMER34-1Q9H9K5 563 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TUFT1Q9NNX1 390 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SLC52A3Q9NQ40 469 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 TMOD3Q9NYL9 352 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 NDUFA13Q9P0J0 144 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 UXTQ9UBK9 157 aaPredicted RBP2.39□□□□□ -2.03
XRN1-211ENST00000477237 TINAGQ9UJW2 476 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 SNX6Q9UNH7 406 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 AURKCQ9UQB9 309 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 CHMP2BQ9UQN3 213 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 AMDHD2Q9Y303 409 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PPIL1Q9Y3C6 166 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 NFE2L3Q9Y4A8 694 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 PCDHGA5Q9Y5G8 931 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ERBINQ96RT1 1412 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ADGRF5Q8IZF2 1346 aa2.39□□□□□ -2.03
XRN1-211ENST00000477237 ERICH3Q5RHP9 1530 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 LOC100506127A0A0U1RQW1 187 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 RNF103-CHMP3A0A140T963 221 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 LOC390937A0A1W2PQ73 354 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SNTNA6NMZ2 147 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 HSPB2A8KAH6 182 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 IQCF5A8MTL0 148 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 A8MXE2 369 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 E9PBE3 544 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 H0YCG3 227 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 K7ERQ8 282 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 RNF103O00237 685 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 DNALI1O14645 258 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 MEIS2O14770 477 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ANGPT2O15123 496 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 RRP8O43159 456 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 CYTIPO60759 359 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 WDR1O75083 606 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SRSF10O75494 262 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 BEST1O76090 585 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 PIGNO95427 931 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 OTCP00480 354 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 IFNA14P01570 189 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FYNP06241 537 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 GSTT2P0CG29 244 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 GSTT2BP0CG30 244 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 MYOD1P15172 320 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 VCLP18206 1134 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ATF6P18850 670 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TYMPP19971 482 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 S1PR1P21453 382 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 PCGF2P35227 344 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SERPINB6P35237 376 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SLC26A3P40879 764 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 PTGER3P43115 390 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CAMLGP49069 296 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 METAP1P53582 386 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TAS2R40P59535 323 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms