RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 CTSCP53634 463 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 SLC35A2P78381 396 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 GRHL2Q6ISB3 625 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 SETD9Q8NE22 299 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 CDC26Q8NHZ8 85 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 ZNF296Q8WUU4 475 aaPredicted RBP20.34■□□□□ 0.85
LIMS2-214ENST00000476932 RIOK2Q9BVS4 552 aaKnown RBP20.34■□□□□ 0.85
LIMS2-214ENST00000476932 DUSP21Q9H596 190 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 DNAAF2Q9NVR5 837 aaKnown RBP20.34■□□□□ 0.85
LIMS2-214ENST00000476932 HCFC1R1Q9NWW0 138 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 ERVK-18Q9QC07 812 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 KIAA1549LQ6ZVL6 1849 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 H0YIV9 168 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 TSPAN6O43657 245 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 NDUFS2O75306 463 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 NUDT7P0C024 238 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 AGTRAPQ6RW13 159 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 KLHDC8AQ8IYD2 350 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 GPR65Q8IYL9 337 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 MYOCQ99972 504 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 CCDC90BQ9GZT6 254 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 SIRT5Q9NXA8 310 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 LMCD1Q9NZU5 365 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 NDRG4Q9ULP0 352 aaKnown RBP20.34■□□□□ 0.85
LIMS2-214ENST00000476932 PCDHB11Q9Y5F2 797 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 PCDHGA10Q9Y5H3 936 aa20.34■□□□□ 0.85
LIMS2-214ENST00000476932 C1orf226A1L170 272 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 PREPP48147 710 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 ITGA1P56199 1179 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 ACSM2AQ08AH3 577 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 NAE1Q13564 534 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 ACSM2BQ68CK6 577 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 TRAM1L1Q8N609 369 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 ABHD11Q8NFV4 315 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 TRUB1Q8WWH5 349 aaKnown RBP20.33■□□□□ 0.85
LIMS2-214ENST00000476932 PPP1R14BQ96C90 147 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 RHNO1Q9BSD3 238 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 TPT1P8Q9HAU6 139 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 PALMDQ9NP74 551 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 PDP1Q9P0J1 537 aaPredicted RBP20.33■□□□□ 0.85
LIMS2-214ENST00000476932 NFKBIL1Q9UBC1 381 aaPredicted RBP20.33■□□□□ 0.85
LIMS2-214ENST00000476932 DGKBQ9Y6T7 804 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 HSPE1-MOB4S4R3N1 261 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 LRRK1Q38SD2 2015 aa20.33■□□□□ 0.85
LIMS2-214ENST00000476932 MKI67P46013 3256 aaKnown RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 E9PQ18 207 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 NPC1O15118 1278 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 MAN1A2O60476 641 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 JRKO75564 520 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 LEFTY1O75610 366 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 CYP2A6P11509 494 aaPredicted RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 BDKRB1P46663 353 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 MASP1P48740 699 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 PCDH1Q08174 1060 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 GAB1Q13480 694 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 ACOX1Q15067 660 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 PIWIL3Q7Z3Z3 882 aaKnown RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 CCDC71Q8IV32 467 aaPredicted RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 SNRNP27Q8WVK2 155 aaKnown RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 CLP1Q92989 425 aaKnown RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 DUSP26Q9BV47 211 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 PCDH10Q9P2E7 1040 aa20.33■□□□□ 0.84
LIMS2-214ENST00000476932 MTCL1Q9Y4B5 1905 aaKnown RBP20.33■□□□□ 0.84
LIMS2-214ENST00000476932 TSPAN11A1L157 253 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 GABRR3A8MPY1 467 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 TMEM229AB2RXF0 380 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 CCL16O15467 120 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 GABARAPO95166 117 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 TIMP2P16035 220 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 IMPA1P29218 277 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 MNX1P50219 401 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 VEZF1Q14119 521 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 PDE12Q6L8Q7 609 aaKnown RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 C1orf52Q8N6N3 182 aaKnown RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 RASGEF1AQ8N9B8 481 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 TCEAL4Q96EI5 215 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 MED8Q96G25 268 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 C7orf34Q96L11 122 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 ASAH2Q9NR71 780 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 SAMHD1Q9Y3Z3 626 aaKnown RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 NOTCH4Q99466 2003 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 CTSLP07711 333 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 HSD3B1P14060 373 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 HSD3B2P26439 372 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 HNF4AP41235 474 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 MAP2K4P45985 399 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 CXCR4P61073 352 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 IL1RL1Q01638 556 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 CREMQ03060 361 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 FAHD1Q6P587 224 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 DCDC5Q6ZRR9 648 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 CAMKMTQ7Z624 323 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 ZNF554Q86TJ5 538 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 HORMAD1Q86X24 394 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 RAVER1Q8IY67 606 aaKnown RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 TTC29Q8NA56 475 aaPredicted RBP20.32■□□□□ 0.84
LIMS2-214ENST00000476932 GLMNQ92990 594 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 MRGPRX3Q96LB0 322 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 TOX2Q96NM4 488 aa20.32■□□□□ 0.84
LIMS2-214ENST00000476932 HEPHQ9BQS7 1158 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms