RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 AIF1LQ9BQI0 150 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 ORAI3Q9BRQ5 295 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 UNKQ9C0B0 810 aaKnown RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 C20orf27Q9GZN8 174 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 EBF2Q9HAK2 575 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 BRF2Q9HAW0 419 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 KCNK13Q9HB14 408 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 FZD3Q9NPG1 666 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SEMA4BQ9NPR2 832 aaPredicted RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TCF7L2Q9NQB0 619 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TMEM184CQ9NVA4 438 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 INTS7Q9NVH2 962 aaKnown RBP6.78□□□□□ -1.32
SHQ1-207ENST00000475558 PNPOQ9NVS9 261 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 HEY2Q9UBP5 337 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 DCTN4Q9UJW0 460 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 PPT2Q9UMR5 302 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SNX7Q9UNH6 387 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 SLC22A14Q9Y267 594 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TMED5Q9Y3A6 229 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 CFAP46Q8IYW2 2715 aa6.78□□□□□ -1.32
SHQ1-207ENST00000475558 TP53BP1Q12888 1972 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 LMO7DNF2Z398 122 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF195O14628 629 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 UBDO15205 165 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CAPN5O15484 640 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 BRINP1O60477 761 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 DIAPH2O60879 1101 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MYO1DO94832 1006 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 THRAP10827 490 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ACPPP15309 386 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 NPPBP16860 134 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CKMT2P17540 419 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 LBPP18428 481 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 RPL10P27635 214 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MAPK1P28482 360 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 IMPA1P29218 277 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PRDX6P30041 224 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CMPK1P30085 196 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 GMPRP36959 345 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PIK3CBP42338 1070 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 GSTM5P46439 218 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MRPL19P49406 292 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CCR8P51685 355 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PGGT1BP53609 377 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 UCNP55089 124 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CLDN6P56747 220 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 NXPH1P58417 271 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CXADRP78310 365 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 E2F1Q01094 437 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TLE3Q04726 772 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PRDX1Q06830 199 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 STX5Q13190 355 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CHIT1Q13231 466 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CLCA4Q14CN2 919 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 SHBQ15464 509 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TBC1D25Q3MII6 688 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 XKR6Q5GH73 641 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MANEAQ5SRI9 462 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PRAMEF14Q5SWL7 426 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 THEMIS2Q5TEJ8 643 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 BROXQ5VW32 411 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 OGFOD2Q6N063 350 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ARMC6Q6NXE6 501 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MED27Q6P2C8 311 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 FAM83HQ6ZRV2 1179 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 LARP4Q71RC2 724 aaKnown RBP eCLIP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 AMIGO1Q86WK6 493 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 C17orf64Q86WR6 236 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CARFQ8N187 725 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF248Q8NDW4 579 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 SRFBP1Q8NEF9 429 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 FAM46DQ8NEK8 389 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MAPK15Q8TD08 544 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF480Q8WV37 535 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 STARD8Q92502 1023 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 MED8Q96G25 268 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 NSL1Q96IY1 281 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 QRFPRQ96P65 431 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 CENPKQ9BS16 269 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TMEM120AQ9BXJ8 343 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TMEM168Q9H0V1 697 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 SRMSQ9H3Y6 488 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ELOVL6Q9H5J4 265 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ACTR5Q9H9F9 607 aaPredicted RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PELI2Q9HAT8 420 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ZBTB26Q9HCK0 441 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 PRDM8Q9NQV8 689 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TXLNGQ9NUQ3 528 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 NDE1Q9NXR1 346 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TAAR2Q9P1P5 351 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ANKMY1Q9P2S6 941 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 TBC1D29Q9UFV1 150 aa6.77□□□□□ -1.33
SHQ1-207ENST00000475558 APOBEC3BQ9UH17 382 aaKnown RBP6.77□□□□□ -1.33
SHQ1-207ENST00000475558 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms