RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 C1orf54Q8WWF1 131 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 TRIM8Q9BZR9 551 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 TSPAN10Q9H1Z9 355 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 KLHL1Q9NR64 748 aa13.26□□□□□ -0.29
CCDC78-209ENST00000474647 UTP6Q9NYH9 597 aaKnown RBP13.26□□□□□ -0.29
CCDC78-209ENST00000474647 EML6Q6ZMW3 1958 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 GOLGA8KD6RF30 607 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 GOLGA8TH3BQL2 631 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 FOXS1O43638 330 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 WISP2O76076 250 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 CCNDBP1O95273 360 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 MATN4O95460 622 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 PKMP14618 531 aaKnown RBP13.25□□□□□ -0.29
CCDC78-209ENST00000474647 EZRP15311 586 aaKnown RBP13.25□□□□□ -0.29
CCDC78-209ENST00000474647 CHRM3P20309 590 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 AVPR1BP47901 424 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 SMSP52788 366 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 MINDY4Q4G0A6 757 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 GARNL3Q5VVW2 1013 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 ICE2Q659A1 982 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 TMEM205Q6UW68 189 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 PLD3Q8IV08 490 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 BEST3Q8N1M1 668 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 MPP5Q8N3R9 675 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 OR2A5Q96R48 311 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 ANKRD10Q9NXR5 420 aa13.25□□□□□ -0.29
CCDC78-209ENST00000474647 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC78-209ENST00000474647 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 E5RI56 91 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 C19orf84I3L1E1 186 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 TXNDC9O14530 226 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 HAT1O14929 419 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 TTI1O43156 1089 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 VAPBO95292 243 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 SYF2O95926 243 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 CATP04040 527 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 CCDC175P0C221 793 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 ZSCAN5DPP0CG00 497 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 ERGP11308 486 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 PNLIPRP1P54315 467 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 BASP1P80723 227 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 KLHL38Q2WGJ6 581 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 THEMIS2Q5TEJ8 643 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 MRNIPQ6NTE8 343 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 TXLNBQ8N3L3 684 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 OR9A4Q8NGU2 314 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 BIRC8Q96P09 236 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 SIGLEC12Q96PQ1 595 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 PKP4Q99569 1192 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 KCNK13Q9HB14 408 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 TREX1Q9NSU2 369 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 PAK5Q9P286 719 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 C19orf25Q9UFG5 118 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
CCDC78-209ENST00000474647 INTS1Q8N201 2190 aaKnown RBP13.24□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF839A8K0R7 811 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 MYO1CO00159 1063 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 SMAPO00193 183 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 PFDN6O15212 129 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 PSIP1O75475 530 aaKnown RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 MLYCDO95822 493 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 EEF1DP29692 281 aaKnown RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 ATP5DP30049 168 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 PRDX1Q06830 199 aaKnown RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 KIF5AQ12840 1032 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 CDSNQ15517 529 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 RNF187Q5TA31 235 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF425Q6IV72 752 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 PRSS41Q7RTY9 318 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 SDCCAG8Q86SQ7 713 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 LPGAT1Q92604 370 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 MFSD3Q96ES6 412 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 ZNF354BQ96LW1 612 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 GPR137Q96N19 417 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 FRMD8P1Q9BZ68 369 aaPredicted RBP13.23□□□□□ -0.29
CCDC78-209ENST00000474647 IL22Q9GZX6 179 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 SYBUQ9NX95 663 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 HCN3Q9P1Z3 774 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 CAPN6Q9Y6Q1 641 aa13.23□□□□□ -0.29
CCDC78-209ENST00000474647 NPIPA5E9PKD4 350 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 H3BMM5 538 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 CLDN14O95500 239 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 SLC16A8O95907 504 aa13.22□□□□□ -0.29
CCDC78-209ENST00000474647 ESR1P03372 595 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms