RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ECHS1P30084 290 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 HSD17B2P37059 387 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 GP5P40197 560 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 SLMAPQ14BN4 828 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 NKG7Q16617 165 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 MUM1Q2TAK8 710 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 PRR30Q53SZ7 412 aaPredicted RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 PRMT9Q6P2P2 845 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 SUSD1Q6UWL2 747 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 PRSS58Q8IYP2 241 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 RBMXL3Q8N7X1 1067 aaKnown RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 PRR7Q8TB68 274 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 HMGCLL1Q8TB92 370 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 MCOLN3Q8TDD5 553 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 ASB11Q8WXH4 323 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 NACC2Q96BF6 587 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 MRRFQ96E11 262 aaKnown RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 HIST1H2AHQ96KK5 128 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 PKP4Q99569 1192 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 OLFM1Q99784 485 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 HIST1H2AJQ99878 128 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 H2AFJQ9BTM1 129 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 DPH7Q9BTV6 452 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 EPS8L2Q9H6S3 715 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 SEMA3GQ9NS98 782 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 CTSFQ9UBX1 484 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 RAB21Q9UL25 225 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 CDC14AQ9UNH5 594 aa14.44□□□□□ -0.1
VARS-223ENST00000474643 RP1L1Q8IWN7 2480 aaPredicted RBP14.44□□□□□ -0.1
VARS-223ENST00000474643 MAST4O15021 2626 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 MAP2K7O14733 419 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 CTIFO43310 598 aaKnown RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 CTSVO60911 334 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 CNOT3O75175 753 aaKnown RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 C8GP07360 202 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 SPRP35270 261 aaPredicted RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 GLRBP48167 497 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 PGGT1BP53609 377 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 USP10Q14694 798 aaKnown RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 UAP1Q16222 522 aaPredicted RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 KBTBD12Q3ZCT8 623 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 AGAP7PQ5VUJ5 663 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 PRAMEF13Q5VWM6 474 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 FRMPD2BQ6IN97 320 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 CYHR1Q6ZMK1 362 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 CISD2Q8N5K1 135 aaKnown RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 MIEF2Q96C03 454 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 TSPAN17Q96FV3 270 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 CNDP1Q96KN2 507 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 AGAP4Q96P64 663 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 TRIM54Q9BYV2 358 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 SLC6A20Q9NP91 592 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 ZNF282Q9UDV7 671 aaPredicted RBP14.43□□□□□ -0.1
VARS-223ENST00000474643 TAC3Q9UHF0 121 aa14.43□□□□□ -0.1
VARS-223ENST00000474643 MED13Q9UHV7 2174 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 GFYI3L273 518 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 MYO1CO00159 1063 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 ALOX12BO75342 701 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 ACPPP15309 386 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 CXCR2P25025 360 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 PNLIPRP1P54315 467 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 TAS2R39P59534 338 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 TIAL1Q01085 375 aaKnown RBP eCLIP14.42□□□□□ -0.1
VARS-223ENST00000474643 POU4F1Q01851 419 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 SRSF1Q07955 248 aaKnown RBP eCLIP14.42□□□□□ -0.1
VARS-223ENST00000474643 SP140Q13342 867 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 NAB1Q13506 487 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 FASTKQ14296 549 aaKnown RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 ARHGAP19Q14CB8 494 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 ERCC6LQ2NKX8 1250 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 GRTP1Q5TC63 336 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 RNF44Q7L0R7 432 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 PARP9Q8IXQ6 854 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 CNPY4Q8N129 248 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 NKAPQ8N5F7 415 aaKnown RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 CSNK1A1LQ8N752 337 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 Q8NA96 180 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 OR2A1Q8NGT9 310 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 SSC4DQ8WTU2 575 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 RBBP8Q99708 897 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 ZNF552Q9H707 407 aaPredicted RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 PARVBQ9HBI1 364 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 GPAMQ9HCL2 828 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 AGPAT4Q9NRZ5 378 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 SLC22A11Q9NSA0 550 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 NINJ2Q9NZG7 142 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 C3orf18Q9UK00 162 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 NFU1Q9UMS0 254 aa14.42□□□□□ -0.1
VARS-223ENST00000474643 MTO1Q9Y2Z2 717 aaKnown RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 COPG1Q9Y678 874 aaKnown RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 PRRC2CQ9Y520 2896 aaKnown RBP14.42□□□□□ -0.1
VARS-223ENST00000474643 SEC16AO15027 2179 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 FITM1A5D6W6 292 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 TCP11X1B4DZS4 312 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 MASP2O00187 686 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 SLC16A5O15375 505 aa14.41□□□□□ -0.1
VARS-223ENST00000474643 PRICKLE3O43900 615 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms