RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KRT71Q3SY84 523 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 NXPE4Q6UWF7 544 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 CSNK1A1LQ8N752 337 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 SLC38A9Q8NBW4 561 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 ABHD11Q8NFV4 315 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 UBTD2Q8WUN7 234 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 MR1Q95460 341 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 PHF21BQ96EK2 531 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 OR2A5Q96R48 311 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 AIF1LQ9BQI0 150 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 PRM3Q9NNZ6 103 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 LHX9Q9NQ69 397 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 TMEM216Q9P0N5 145 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 DHCR7Q9UBM7 475 aaKnown RBP11.87□□□□□ -0.51
DDX56-209ENST00000473924 NDOR1Q9UHB4 597 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 TNPO3Q9Y5L0 923 aaKnown RBP11.87□□□□□ -0.51
DDX56-209ENST00000473924 ACACBO00763 2458 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 WDFY3Q8IZQ1 3526 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 ASPMQ8IZT6 3477 aa11.87□□□□□ -0.51
DDX56-209ENST00000473924 A0A087WV48 116 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 TRBC2A0A5B9 178 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 HYKKA2RU49 373 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 MEN1O00255 615 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 KLK8O60259 260 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 C1GALT1C1LP0DN25 315 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 EPB42P16452 691 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 AGXTP21549 392 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 CXCR2P25025 360 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 BCL6P41182 706 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 STAT5AP42229 794 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 GPS2Q13227 327 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 COL9A2Q14055 689 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 RBBP5Q15291 538 aaKnown RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 C1orf189Q5VU69 101 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 YOD1Q5VVQ6 348 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 ATG9BQ674R7 924 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 RHBDD2Q6NTF9 364 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 C16orf46Q6P387 395 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 FAM199XQ6PEV8 388 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 VASH2Q86V25 355 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 SRRM1Q8IYB3 904 aaKnown RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 DSELQ8IZU8 1212 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 C4orf33Q8N1A6 199 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 KRT78Q8N1N4 520 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 TEX9Q8N6V9 391 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 OR4K1Q8NGD4 311 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 LRFN5Q96NI6 719 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 CCNL2Q96S94 520 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 TMEM109Q9BVC6 243 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
DDX56-209ENST00000473924 CUTCQ9NTM9 273 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 LGALS13Q9UHV8 139 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 GRID1Q9ULK0 1009 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 ASB1Q9Y576 335 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 HEATR5BQ9P2D3 2071 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 APC2O95996 2303 aa11.86□□□□□ -0.51
DDX56-209ENST00000473924 FREM2Q5SZK8 3169 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ACACAQ13085 2346 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 KCNE1BA0A087WTH5 132 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 LOC101059948A0A1B0GTJ6 334 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 FITM1A5D6W6 292 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 STX16-NPEPL1H3BU86 382 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 STX16O14662 325 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 RGS16O15492 202 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 LCMT2O60294 686 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 KATNA1O75449 491 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 SIX3O95343 332 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 STATHP02808 62 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 SERPIND1P05546 499 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 SLC35G6P0C7Q6 338 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 TCN2P20062 427 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ITPKBP27987 946 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 RORAP35398 523 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 DLSTP36957 453 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ARL1P40616 181 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 PIK3CGP48736 1102 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 UCNP55089 124 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 DCDP81605 110 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 REEP5Q00765 189 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 IRF8Q02556 426 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 TLE3Q04726 772 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 SLBPQ14493 270 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX56-209ENST00000473924 PCBP2Q15366 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDX56-209ENST00000473924 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 NDUFA9Q16795 377 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 HIST2H2AA3Q6FI13 130 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 CCDC81Q6ZN84 652 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 SLCO4C1Q6ZQN7 724 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms