RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ONECUT2O95948 504 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 ANXA5P08758 320 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 FAM153BP0C7A2 387 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 NCF1P14598 390 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 HRH2P25021 359 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 BCL6P41182 706 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 CCR10P46092 362 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 ATP6V0D1P61421 351 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 IRF9Q00978 393 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 MEF2AQ02078 507 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 FAM214AQ32MH5 1076 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 FAM153CQ494X1 144 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 CATSPEREQ5SY80 951 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 RAPH1Q70E73 1250 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 THOC6Q86W42 341 aaKnown RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 ABHD11Q8NFV4 315 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 RERGQ96A58 199 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 RHBDF1Q96CC6 855 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 CABS1Q96KC9 395 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 MACROD1Q9BQ69 325 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 C17orf62Q9BQA9 187 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 TMEM79Q9BSE2 394 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 SNX15Q9NRS6 342 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 IGSF5Q9NSI5 407 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 CTSFQ9UBX1 484 aa18.05■□□□□ 0.48
PTCD3-210ENST00000473829 GPN3Q9UHW5 284 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 MRPS2Q9Y399 296 aaKnown RBP18.05■□□□□ 0.48
PTCD3-210ENST00000473829 CFAP46Q8IYW2 2715 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 TAPBPO15533 448 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 LCMT2O60294 686 aaKnown RBP18.04■□□□□ 0.48
PTCD3-210ENST00000473829 CRABP2P29373 138 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 GDF5P43026 501 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 SLC6A12P48065 614 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 KCNC1P48547 511 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 RPS15AP62244 130 aaKnown RBP18.04■□□□□ 0.48
PTCD3-210ENST00000473829 FBXO48Q5FWF7 155 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 CPZQ66K79 652 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 GPSM1Q86YR5 675 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 CENPLQ8N0S6 344 aaPredicted RBP18.04■□□□□ 0.48
PTCD3-210ENST00000473829 ZNF740Q8NDX6 193 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 OR4K1Q8NGD4 311 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 KCTD4Q8WVF5 259 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 APOBEC4Q8WW27 367 aaKnown RBP18.04■□□□□ 0.48
PTCD3-210ENST00000473829 SLC44A1Q8WWI5 657 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 SLC5A11Q8WWX8 675 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 KIAA1191Q96A73 305 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 FKBP10Q96AY3 582 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 PAFAH2Q99487 392 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 SLC22A14Q9Y267 594 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 MAN2B2Q9Y2E5 1009 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 PADI2Q9Y2J8 665 aa18.04■□□□□ 0.48
PTCD3-210ENST00000473829 PTRH2Q9Y3E5 179 aaKnown RBP18.04■□□□□ 0.48
PTCD3-210ENST00000473829 KCNE1BA0A087WTH5 132 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 ALDOAP04075 364 aaKnown RBP18.03■□□□□ 0.48
PTCD3-210ENST00000473829 UMODP07911 640 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 MYBL2P10244 700 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 TFEBP19484 476 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 HNMTP50135 292 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 EMP3P54852 163 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 CHAF1BQ13112 559 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 MUM1Q2TAK8 710 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 TEX35Q5T0J7 233 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 OVCH1Q7RTY7 1134 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 KLHDC8AQ8IYD2 350 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 OR2Y1Q8NGV0 311 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 NXNL1Q96CM4 212 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 TRIM55Q9BYV6 548 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 ALG9Q9H6U8 611 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 NUP210LQ5VU65 1888 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 MED13Q9UHV7 2174 aa18.03■□□□□ 0.48
PTCD3-210ENST00000473829 FFAR3O14843 346 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 GPR42O15529 346 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 FOXS1O43638 330 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 DNAJB5O75953 348 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 WDR47O94967 919 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 C2P06681 752 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 LTA4HP09960 611 aaKnown RBP18.02■□□□□ 0.48
PTCD3-210ENST00000473829 OTX2P32243 289 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 FOLR3P41439 243 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 CCR8P51685 355 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 PMS2P54278 862 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 KCNAB2Q13303 367 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 NKG7Q16617 165 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 TMPRSS11BQ86T26 416 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 TBC1D1Q86TI0 1168 aaPredicted RBP18.02■□□□□ 0.48
PTCD3-210ENST00000473829 ISCA2Q86U28 154 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 ZNF843Q8N446 348 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 PDPRQ8NCN5 879 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 DCAKDQ8WVC6 231 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 THAP4Q8WY91 577 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 EXT2Q93063 718 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 ESAMQ96AP7 390 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 TM4SF19Q96DZ7 209 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 SPSB2Q99619 263 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 TXLNGYQ9BZA5 131 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 SLC26A1Q9H2B4 701 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 ZNF304Q9HCX3 659 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 GEMIN8Q9NWZ8 242 aaKnown RBP18.02■□□□□ 0.48
PTCD3-210ENST00000473829 RNF112Q9ULX5 631 aa18.02■□□□□ 0.48
PTCD3-210ENST00000473829 ACOT9Q9Y305 439 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms