RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 NCOR1O75376 2440 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 COL2A1P02458 1487 aaPredicted RBP4.84□□□□□ -1.63
CNOT9-206ENST00000473626 SH3TC1Q8TE82 1336 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 TRBC2A0A5B9 178 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 UBE2CO00762 179 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 UFL1O94874 794 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 LINGO3P0C6S8 592 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 CCL5P13501 91 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 CA4P22748 312 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 PDX1P52945 283 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 MAPK12P53778 367 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 RALGDSQ12967 914 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 HSPB3Q12988 150 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 RASA2Q15283 850 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 ITPRIPL2Q3MIP1 535 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 ZNF876PQ49A33 203 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 XKR3Q5GH77 459 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 FFAR4Q5NUL3 377 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 ARHGAP11AQ6P4F7 1023 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 TSPAN14Q8NG11 270 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 U2AF1L4Q8WU68 220 aaKnown RBP4.84□□□□□ -1.63
CNOT9-206ENST00000473626 SSMEM1Q8WWF3 244 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 SLAMF9Q96A28 289 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 NOL11Q9H8H0 719 aaKnown RBP4.84□□□□□ -1.63
CNOT9-206ENST00000473626 ANKZF1Q9H8Y5 726 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 ZNF701Q9NV72 531 aaPredicted RBP4.84□□□□□ -1.63
CNOT9-206ENST00000473626 CACNG4Q9UBN1 327 aa4.84□□□□□ -1.63
CNOT9-206ENST00000473626 CACNA1AO00555 2505 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 FAM205AQ6ZU69 1335 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 MYO3BQ8WXR4 1341 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 LOC101059948A0A1B0GTJ6 334 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 EDDM13A0A1B0GTR0 161 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 PCDH7O60245 1069 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 MYL6BP14649 208 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 GNB1P62873 340 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 CALD1Q05682 793 aaKnown RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 P2RY6Q15077 328 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 VWC2Q2TAL6 325 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 SYT14P1Q58G82 188 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 ARHGEF16Q5VV41 709 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 SLC30A6Q6NXT4 461 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 SLC16A9Q7RTY1 509 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 CENPVQ7Z7K6 275 aaPredicted RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 RTN4RL2Q86UN3 420 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 IQCHQ86VS3 1027 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 CDK20Q8IZL9 346 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 EID3Q8N140 333 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 OR6J1Q8NGC5 347 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 CTCFLQ8NI51 663 aaPredicted RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 RAET1EQ8TD07 263 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 LITAFQ99732 161 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 NUP85Q9BW27 656 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 SDR39U1Q9NRG7 319 aaPredicted RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 INTS9Q9NV88 658 aaKnown RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 INTS10Q9NVR2 710 aaKnown RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 C5AR2Q9P296 337 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 DDX25Q9UHL0 483 aaKnown RBP4.83□□□□□ -1.64
CNOT9-206ENST00000473626 TMED3Q9Y3Q3 217 aa4.83□□□□□ -1.64
CNOT9-206ENST00000473626 MGAMO43451 1857 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 CCL15-CCL14A0A0B4J2E2 113 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 HHLA1C9JL84 531 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 TRMUO75648 421 aaKnown RBP4.82□□□□□ -1.64
CNOT9-206ENST00000473626 PIGNO95427 931 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 NADKO95544 446 aaPredicted RBP4.82□□□□□ -1.64
CNOT9-206ENST00000473626 SQLEQ14534 574 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 CCL15Q16663 113 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 ELFN2Q5R3F8 820 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 MCM10Q7L590 875 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 NUP54Q7Z3B4 507 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 FAM76AQ8TAV0 307 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 OPTNQ96CV9 577 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 FNBP1Q96RU3 617 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 FAM129AQ9BZQ8 928 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 DEFB129Q9H1M3 183 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 ST6GALNAC4Q9H4F1 302 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 TRMT112Q9UI30 125 aaKnown RBP4.82□□□□□ -1.64
CNOT9-206ENST00000473626 ZDHHC2Q9UIJ5 367 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 TTLL3Q9Y4R7 772 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 RPS6KL1Q9Y6S9 549 aa4.82□□□□□ -1.64
CNOT9-206ENST00000473626 DDX60LQ5H9U9 1706 aaKnown RBP4.82□□□□□ -1.64
CNOT9-206ENST00000473626 TCRBV21S2A2A0A5A6 115 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 ATP6V0E1O15342 81 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 DDHD2O94830 711 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 C22orf31O95567 290 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 ACSL3O95573 720 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 GNB3P16520 340 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 CAPN2P17655 700 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 EFNA1P20827 205 aaPredicted RBP4.81□□□□□ -1.64
CNOT9-206ENST00000473626 MT3P25713 68 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 HOXD10P28358 340 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 MNDAP41218 407 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 MTHFRP42898 656 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 ZNF75DP51815 510 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
CNOT9-206ENST00000473626 ATP12AP54707 1039 aa4.81□□□□□ -1.64
CNOT9-206ENST00000473626 CSE1LP55060 971 aaKnown RBP4.81□□□□□ -1.64
CNOT9-206ENST00000473626 MAT1AQ00266 395 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms