RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ARMC8Q8IUR7 673 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 BBS7Q8IWZ6 715 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 HTRA1Q92743 480 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 SLC38A4Q969I6 547 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 HHIPQ96QV1 700 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 SIGLEC11Q96RL6 698 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 ITPAQ9BY32 194 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 STOML2Q9UJZ1 356 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 VIPP01282 170 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 COL6A1P12109 1028 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 CD22P20273 847 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 AOAHP28039 575 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 C21orf33P30042 268 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 PPP3CCP48454 512 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 TRPC1P48995 793 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 CCL23P55773 120 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 UGT8Q16880 541 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 COLEC12Q5KU26 742 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 UBE2UQ5VVX9 321 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 GPR153Q6NV75 609 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 MTERF1Q99551 399 aaKnown RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 SMG9Q9H0W8 520 aaKnown RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 KIAA1522Q9P206 1035 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 MAGEB17A8MXT2 336 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 MRPS14O60783 128 aaKnown RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 GSTT2P0CG29 244 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 GSTT2BP0CG30 244 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 SERPINB1P30740 379 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 TPTEP56180 551 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 ITGA1P56199 1179 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 SREBF2Q12772 1141 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 CARTPTQ16568 116 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 FAHD1Q6P587 224 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 NEK10Q6ZWH5 1172 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 CYP2U1Q7Z449 544 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 SYT12Q8IV01 421 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 PGBD3Q8N328 593 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 ASIC4Q96FT7 647 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 PITX2Q99697 317 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 COPS4Q9BT78 406 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 C2orf49Q9BVC5 232 aaPredicted RBP20.42■□□□□ 0.86
COL18A1-207ENST00000473212 EPS8L2Q9H6S3 715 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 AMBNQ9NP70 447 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 TMED5Q9Y3A6 229 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 PCDHGA6Q9Y5G7 932 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 CDH23Q9H251 3354 aa20.42■□□□□ 0.86
COL18A1-207ENST00000473212 GFRA2O00451 464 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 AIREO43918 545 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 ABLIM3O94929 683 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 GPX2P18283 190 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 PRPH2P23942 346 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 NSG1P42857 185 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 WNT3P56703 355 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 MTAPQ13126 283 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 SELENBP1Q13228 472 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 KCNJ8Q15842 424 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 GGTA1PQ4G0N0 100 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF783Q6ZMS7 281 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 LRRC70Q7Z2Q7 622 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 DEFB128Q7Z7B8 93 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 LYSMD2Q8IV50 215 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 P3H2Q8IVL5 708 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 PROX1Q92786 737 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 MAL2Q969L2 176 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 KCNC2Q96PR1 638 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 COPS8Q99627 209 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 RNF6Q9Y252 685 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 RBMX2Q9Y388 322 aaKnown RBP20.41■□□□□ 0.86
COL18A1-207ENST00000473212 TSC22D4Q9Y3Q8 395 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF106Q9H2Y7 1883 aaKnown RBP20.41■□□□□ 0.86
COL18A1-207ENST00000473212 PRRG1O14668 218 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 UPK1BO75841 260 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 C9P02748 559 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 SEPHS1P49903 392 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF404Q494X3 552 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 LHX8Q68G74 356 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 RETSATQ6NUM9 610 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 SCAIQ8N9R8 606 aa20.41■□□□□ 0.86
COL18A1-207ENST00000473212 C6orf62Q9GZU0 229 aaPredicted RBP20.41■□□□□ 0.86
COL18A1-207ENST00000473212 TBX1O43435 398 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 SCN2BO60939 215 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 NTRK1P04629 796 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 PABPC1P11940 636 aaKnown RBP20.4■□□□□ 0.86
COL18A1-207ENST00000473212 COX7A2P14406 83 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 PRPS1L1P21108 318 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 GPR33Q49SQ1 333 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 FRG2Q64ET8 278 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 ERICH5Q6P6B1 374 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 Q6ZNB5 142 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 MSANTD1Q6ZTZ1 278 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 SLC43A3Q8NBI5 491 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 FRG2BQ96QU4 278 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 ITGB1BP2Q9UKP3 347 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 TMEM202A6NGA9 273 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 M0R082 166 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 CBSLP0DN79 551 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 GADD45AP24522 165 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 CBSP35520 551 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 CRYBA2P53672 197 aa20.4■□□□□ 0.86
COL18A1-207ENST00000473212 CHIT1Q13231 466 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms