RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ESAMQ96AP7 390 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 RNF31Q96EP0 1072 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 OR6C1Q96RD1 312 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 CTRCQ99895 268 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 ROPN1BQ9BZX4 212 aaPredicted RBP8.73□□□□□ -1.01
SMC4-214ENST00000472991 ROPN1Q9HAT0 212 aaPredicted RBP8.73□□□□□ -1.01
SMC4-214ENST00000472991 FAM60AQ9NP50 221 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 ASCL3Q9NQ33 180 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 INTS7Q9NVH2 962 aaKnown RBP8.73□□□□□ -1.01
SMC4-214ENST00000472991 SLC39A1Q9NY26 324 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
SMC4-214ENST00000472991 LGALS13Q9UHV8 139 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 SH2B3Q9UQQ2 575 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 FREM2Q5SZK8 3169 aa8.73□□□□□ -1.01
SMC4-214ENST00000472991 IGKV1-8A0A0C4DH67 115 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 CCDC189A1A4V9 331 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 SYCE1LA8MT33 242 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TAPBPO15533 448 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 HCRTR1O43613 425 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 GLRA3O75311 464 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 WDR47O94967 919 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 RBP1P09455 135 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 CDH1P12830 882 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 MTHFD2P13995 350 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 GFAPP14136 432 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 GRNP28799 593 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 RBMS1P29558 406 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 GDF5P43026 501 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 SLC6A12P48065 614 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 HSPA7P48741 367 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 HNMTP50135 292 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 ABATP80404 500 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 MC2RQ01718 297 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 ACY1Q03154 408 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 PRDX1Q06830 199 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 CYP4F3Q08477 520 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 NAA25Q14CX7 972 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 CDKL4Q5MAI5 379 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 CEP85LQ5SZL2 805 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 SULT1C3Q6IMI6 304 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 C16orf46Q6P387 395 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 IGF2-ASQ6U949 168 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 SH2D5Q6ZV89 423 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 ADCK2Q7Z695 626 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TRABD2AQ86V40 505 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 THOC6Q86W42 341 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 C17orf64Q86WR6 236 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 IQCKQ8N0W5 287 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 C4orf33Q8N1A6 199 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TCAIMQ8N3R3 496 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 MDM1Q8TC05 714 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 USP7Q93009 1102 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TCTN2Q96GX1 697 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 SLC46A1Q96NT5 459 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 OR4K3Q96R72 315 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TAAR9Q96RI9 348 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 HAUS8Q9BT25 410 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 DPH7Q9BTV6 452 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 GSX2Q9BZM3 304 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 PCBD2Q9H0N5 130 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 MRPL46Q9H2W6 279 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 FANCEQ9HB96 536 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 FBXO8Q9NRD0 319 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 FGF21Q9NSA1 209 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 ARGLU1Q9NWB6 273 aaPredicted RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 FOXJ2Q9P0K8 574 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 TMEM216Q9P0N5 145 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 RARRES3Q9UL19 164 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 ASB1Q9Y576 335 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 B3GALT1Q9Y5Z6 326 aa8.72□□□□□ -1.01
SMC4-214ENST00000472991 MAP1BP46821 2468 aaKnown RBP8.72□□□□□ -1.01
SMC4-214ENST00000472991 NUP210LQ5VU65 1888 aa8.71□□□□□ -1.01
SMC4-214ENST00000472991 ASPMQ8IZT6 3477 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 A0A0J9YVX5 310 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 OR2A25A4D2G3 310 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 CDRT15L2A8MXV6 281 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 TARM1B6A8C7 271 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 TMEM150CB9EJG8 249 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 C9orf172C9J069 976 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 MAP2K7O14733 419 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 HAT1O14929 419 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 POLR1CO15160 346 aaPredicted RBP8.71□□□□□ -1.02
SMC4-214ENST00000472991 RGS16O15492 202 aaPredicted RBP8.71□□□□□ -1.02
SMC4-214ENST00000472991 CCNT2O60583 730 aaKnown RBP8.71□□□□□ -1.02
SMC4-214ENST00000472991 CTSVO60911 334 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 STK16O75716 305 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 IPO13O94829 963 aaKnown RBP8.71□□□□□ -1.02
SMC4-214ENST00000472991 TIAF1O95411 115 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 GSTA1P08263 222 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 SBK3P0C264 359 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 C1QTNF9P0C862 333 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 FGF5P12034 268 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 H2AFXP16104 143 aaPredicted RBP8.71□□□□□ -1.02
SMC4-214ENST00000472991 NPPBP16860 134 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 KRT4P19013 534 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 SLC5A2P31639 672 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 GGT5P36269 586 aa8.71□□□□□ -1.02
SMC4-214ENST00000472991 GABRA4P48169 554 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms