RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 MT-CO1P00395 513 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 GOT2P00505 430 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 CYBBP04839 570 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ALPPP05187 535 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 MAGP20916 626 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ENPP1P22413 925 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FMO3P31513 532 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 AIF1P55008 147 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FAPQ12884 760 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 FOXC1Q12948 553 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 IKZF1Q13422 519 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 OLIG2Q13516 323 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 CCINQ13939 588 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 TBCEQ15813 527 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 Q5BKY6 102 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 NXNL2Q5VZ03 156 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 KIAA0930Q6ICG6 404 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 SLC46A3Q7Z3Q1 461 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 TMEM130Q8N3G9 435 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SPATA6LQ8N4H0 392 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 LHFPL5Q8TAF8 219 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 LRRC20Q8TCA0 184 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 PHF21BQ96EK2 531 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 TMEM74Q96NL1 305 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 C17orf62Q9BQA9 187 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 SLC30A2Q9BRI3 323 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 KCNN2Q9H2S1 579 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 NARFLQ9H6Q4 476 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ACTR8Q9H981 624 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 ZBTB20Q9HC78 741 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 POLG2Q9UHN1 485 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 TBC1D24Q9ULP9 559 aa9.8□□□□□ -0.84
APTX-216ENST00000472896 AAR2Q9Y312 384 aaKnown RBP9.8□□□□□ -0.84
APTX-216ENST00000472896 CEP295Q9C0D2 2601 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 LINC00862A6NCI5 91 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 C4orf47A7E2U8 309 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 LEUTXA8MZ59 168 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 CD3EAPO15446 510 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 CACNG3O60359 315 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 OR7A10O76100 309 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 CDK14O94921 469 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 VNN2O95498 520 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 MPLP40238 635 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SLC1A2P43004 574 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 ZFP36L2P47974 494 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 HCAR3P49019 387 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 RPL34P49207 117 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 YBX1P67809 324 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 SH3BP2P78314 561 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 ELP6Q0PNE2 266 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 CTBP1Q13363 440 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 PCSK7Q16549 785 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 ARMC4Q5T2S8 1044 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SHQ1Q6PI26 577 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 ALKAL1Q6UXT8 129 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 DPH6Q7L8W6 267 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 NRARPQ7Z6K4 114 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 TSPYL5Q86VY4 417 aaPredicted RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 DENND6AQ8IWF6 608 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SCUBE3Q8IX30 993 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 YAF2Q8IY57 180 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 TMEM80Q96HE8 168 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 C8orf48Q96LL4 319 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 PGLYRP2Q96PD5 576 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SDHCQ99643 169 aaPredicted RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 ROGDIQ9GZN7 287 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SLC22A4Q9H015 551 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 MIR1-1HGQ9H1L0 117 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 PLEKHA5Q9HAU0 1116 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 DYRK4Q9NR20 520 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 ZMAT5Q9UDW3 170 aaKnown RBP9.79□□□□□ -0.84
APTX-216ENST00000472896 SNX7Q9UNH6 387 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 SNX6Q9UNH7 406 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 CFL2Q9Y281 166 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 AUP1Q9Y679 476 aa9.79□□□□□ -0.84
APTX-216ENST00000472896 A0A1W2PRU2 124 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 KCNK1O00180 336 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 PLK4O00444 970 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 C1QBP02746 253 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 ITGB3P05106 788 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 ACADMP11310 421 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 TPH1P17752 444 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 NFKB1P19838 968 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 GADD45AP24522 165 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 IGFBP5P24593 272 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 TALDO1P37837 337 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 GZMKP49863 264 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 OLR1P78380 273 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 RING1Q06587 406 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 ZNF33AQ06730 810 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 BAMBIQ13145 260 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 PWP1Q13610 501 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 MAD2L1BPQ15013 274 aaPredicted RBP9.78□□□□□ -0.84
APTX-216ENST00000472896 PROX2Q3B8N5 592 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 SLC25A52Q3SY17 297 aa9.78□□□□□ -0.84
APTX-216ENST00000472896 TIMM50Q3ZCQ8 353 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms