RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 WDR91A4D1P6 747 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 HMGB1P1B2RPK0 211 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 H3BMH7 237 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 CLGNO14967 610 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 WFS1O76024 890 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 TIAF1O95411 115 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 C1GALT1C1LP0DN25 315 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 CCR8P51685 355 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 MAPK10P53779 464 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 DNAJB13P59910 316 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 SNRPNP63162 240 aaKnown RBP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 MC2RQ01718 297 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 FOXM1Q08050 763 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 TUBB3Q13509 450 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 E2F2Q14209 437 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 SLBPQ14493 270 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 XKR6Q5GH73 641 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 PRAMEF17Q5VTA0 474 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 LIPMQ5VYY2 423 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 ATG9BQ674R7 924 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 METTL2BQ6P1Q9 378 aaKnown RBP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 ANKRD53Q8N9V6 530 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 WDR36Q8NI36 951 aaKnown RBP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 TRPC4APQ8TEL6 797 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 GRAMD1AQ96CP6 724 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 WDR34Q96EX3 536 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 OR2A5Q96R48 311 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 FGF21Q9NSA1 209 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 STARD5Q9NSY2 213 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 GEMIN8Q9NWZ8 242 aaKnown RBP14.16□□□□□ -0.14
COL9A3-209ENST00000469852 MID2Q9UJV3 735 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 ASPMQ8IZT6 3477 aa14.16□□□□□ -0.14
COL9A3-209ENST00000469852 TMEM150CB9EJG8 249 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 UBFD1O14562 309 aaKnown RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 P2RX6O15547 441 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 ATP8B1O43520 1251 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 TRIM13O60858 407 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 KATNA1O75449 491 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 HRH2P25021 359 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 ARRB2P32121 409 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 GABREP78334 506 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 IRF8Q02556 426 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 CLCQ05315 142 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 PCDH1Q08174 1060 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 RBBP7Q16576 425 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 TMTC4Q5T4D3 741 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 FRMD7Q6ZUT3 714 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 VN1R4Q7Z5H5 301 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 MCATQ8IVS2 390 aaKnown RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 OR6Y1Q8NGX8 325 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 CCDC126Q96EE4 140 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 PTCD3Q96EY7 689 aaKnown RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 ZFYVE21Q9BQ24 234 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 MACROD1Q9BQ69 325 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 CAPS2Q9BXY5 557 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 SPRTNQ9H040 489 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 TNFRSF12AQ9NP84 129 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 ZNF490Q9ULM2 529 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-209ENST00000469852 PLCL2Q9UPR0 1127 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 RNF11Q9Y3C5 154 aa14.15□□□□□ -0.14
COL9A3-209ENST00000469852 KCNE1BA0A087WTH5 132 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 TRBC2A0A5B9 178 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 C1QTNF9BB2RNN3 333 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 B4E171 279 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 C9orf172C9J069 976 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 H0YGG7 62 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 MSL3P1P0C860 447 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 C1QTNF9P0C862 333 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 JMJD7P0C870 316 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 TSPAN7P41732 249 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 CASP2P42575 452 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 SLC18A1P54219 525 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 VSX2P58304 361 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 ERVPABLB-1P60509 514 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 ARF3P61204 181 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 ACY1Q03154 408 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 EIF3IQ13347 325 aaKnown RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 NAA25Q14CX7 972 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 TBCCQ15814 346 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 LETMD1Q6P1Q0 360 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 SYVN1Q86TM6 617 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 LSMEM2Q8N112 164 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 RNF175Q8N4F7 328 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 OR4F6Q8NGB9 312 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 PPP4R1Q8TF05 950 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 USP7Q93009 1102 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 ZNF285Q96NJ3 590 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 PAIP2Q9BPZ3 127 aaKnown RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 AIF1LQ9BQI0 150 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 NTMT1Q9BV86 223 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 SARGQ9BW04 601 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-209ENST00000469852 SHCBP1LQ9BZQ2 653 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 EHD1Q9H4M9 534 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 ACTR8Q9H981 624 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 POLR1BQ9H9Y6 1135 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 FBXO8Q9NRD0 319 aa14.14□□□□□ -0.15
COL9A3-209ENST00000469852 SLC39A1Q9NY26 324 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms