RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ART3Q13508 389 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 NAA30Q147X3 362 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 MRNIPQ6NTE8 343 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF549Q6P9A3 640 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 CYHR1Q6ZMK1 362 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 NCCRP1Q6ZVX7 275 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 GSTA5Q7RTV2 222 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 DENND6AQ8IWF6 608 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 CYTH2Q99418 400 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 NPAS2Q99743 824 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 VN1R1Q9GZP7 353 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 DRC3Q9H069 523 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 EIF2B3Q9NR50 452 aaKnown RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 FBXO6Q9NRD1 293 aaPredicted RBP11.61□□□□□ -0.55
HDAC3-204ENST00000469207 RIC8BQ9NVN3 520 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 SEC14L3Q9UDX4 400 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 SOX13Q9UN79 622 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 AKAP9Q99996 3911 aa11.61□□□□□ -0.55
HDAC3-204ENST00000469207 OR5H15A6NDH6 313 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 E5RI56 91 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 SGK494L7N484 410 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 DNAJB6O75190 326 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 ESR1P03372 595 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 C8orf89P0DMQ9 161 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 HTR1EP28566 365 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 VPS41P49754 854 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 MFSD4BQ5TF39 518 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 ABHD17BQ5VST6 288 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 GARNL3Q5VVW2 1013 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 ANKRD22Q5VYY1 191 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 NEPROQ6NW34 567 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 RIPOR1Q6ZS17 1223 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 VN1R4Q7Z5H5 301 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 CILP2Q8IUL8 1156 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 PRELID2Q8N945 189 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 RERGQ96A58 199 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-204ENST00000469207 MVB12AQ96EY5 273 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 SIGLEC12Q96PQ1 595 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 TSPAN10Q9H1Z9 355 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-204ENST00000469207 KLHL1Q9NR64 748 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 C14orf105Q9NVL8 296 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 HCN3Q9P1Z3 774 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 ABI3Q9P2A4 366 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 SH2B3Q9UQQ2 575 aa11.6□□□□□ -0.55
HDAC3-204ENST00000469207 OTOGQ6ZRI0 2925 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CPAMD8Q8IZJ3 1885 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 FEZF1A0PJY2 475 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 C19orf84I3L1E1 186 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 PRPF4O43172 522 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 LCMT2O60294 686 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 PRAMEF2O60811 474 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 FGGP02679 453 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CATP04040 527 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 EZRP15311 586 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 IL1RNP18510 177 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 FDXRP22570 491 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 IMPA1P29218 277 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ATP5DP30049 168 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CXCR5P32302 372 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CA7P43166 264 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ADARP55265 1226 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 FAM53BQ14153 422 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 C3AR1Q16581 482 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 BTBD16Q32M84 506 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 MINDY4Q4G0A6 757 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ZNF766Q5HY98 468 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 THEMIS2Q5TEJ8 643 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 SPINK14Q6IE38 97 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CPEB2Q7Z5Q1 589 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CAND1Q86VP6 1230 aaKnown RBP11.59□□□□□ -0.55
HDAC3-204ENST00000469207 BEST3Q8N1M1 668 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 KCT2Q8NC54 265 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 OR51Q1Q8NH59 317 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ADAMTS18Q8TE60 1221 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 ASB11Q8WXH4 323 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 TCF12Q99081 682 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 TUBB6Q9BUF5 446 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 TINAGQ9UJW2 476 aa11.59□□□□□ -0.55
HDAC3-204ENST00000469207 CTAGE9A4FU28 777 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 FAM227AF5H4B4 570 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 H3BMM5 538 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 GOLGA8MH3BSY2 632 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 GFYI3L273 518 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CDC123O75794 336 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 HAUS5O94927 633 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 B3GALT4O96024 378 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CRYABP02511 175 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 ICAM2P13598 275 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 TPSB2P20231 275 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 OGNP20774 298 aaKnown RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 COILP38432 576 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-204ENST00000469207 CD96P40200 585 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 AVPR1BP47901 424 aa11.58□□□□□ -0.56
HDAC3-204ENST00000469207 TUBA3CQ13748 450 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms