RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TTLL3Q9Y4R7 772 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 ZNF318Q5VUA4 2279 aa3.5□□□□□ -1.85
SMC4-207ENST00000467263 SERPING1P05155 500 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 FYNP06241 537 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 ERCC2P18074 760 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 ELAVL4P26378 380 aaKnown RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 RBMS1P29558 406 aaKnown RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 OR3A2P47893 321 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 TMEM50BP56557 158 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 DLK1P80370 383 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 ILF2Q12905 390 aaKnown RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 COG2Q14746 738 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 TAB1Q15750 504 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 PTGISQ16647 500 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 GLIPR1L2Q4G1C9 344 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 OR4C11Q6IEV9 310 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 PPP1R21Q6ZMI0 780 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 GPRIN3Q6ZVF9 776 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 SLC24A5Q71RS6 500 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 FCRLAQ7L513 359 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 KRT74Q7RTS7 529 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 SPAG16Q8N0X2 631 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 PRSS33Q8NF86 280 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 EXT2Q93063 718 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 CNRIP1Q96F85 164 aaPredicted RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 PRICKLE1Q96MT3 831 aaPredicted RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 SPATA33Q96N06 139 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 KATNB1Q9BVA0 655 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 GTPBP2Q9BX10 602 aaKnown RBP3.49□□□□□ -1.85
SMC4-207ENST00000467263 RABEP2Q9H5N1 569 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 MUTYHQ9UIF7 546 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 PRDM4Q9UKN5 801 aa3.49□□□□□ -1.85
SMC4-207ENST00000467263 EPM2AB3EWF7 344 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 C2CD4DB7Z1M9 353 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 KRT33AO76009 404 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 PENKP01210 267 aaPredicted RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 STAG3L1P0CL83 205 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 ACADSP16219 412 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 PDHA2P29803 388 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 HSD17B3P37058 310 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 CETN2P41208 172 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 MS4A2Q01362 244 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 ELAVL2Q12926 359 aaKnown RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 SGCGQ13326 291 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 RAPSNQ13702 412 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 FAM189A2Q15884 450 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 MTHFSDQ2M296 383 aaKnown RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 TCP11X2Q5H9J9 407 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 ZNF343Q6P1L6 599 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 NOTUMQ6P988 496 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 CYB5D1Q6P9G0 228 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 FRRS1Q6ZNA5 592 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 CHMP1BQ7LBR1 199 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 FAM219AQ8IW50 185 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 RCOR2Q8IZ40 523 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 OR8H2Q8N162 312 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 LYG1Q8N1E2 194 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 FAM89BQ8N5H3 189 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 CCDC191Q8NCU4 936 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 MIPOL1Q8TD10 442 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 ATXN7L3BQ96GX2 97 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 AGAP4Q96P64 663 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 BTBD9Q96Q07 612 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 NDNQ99608 321 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 CDCA3Q99618 268 aaPredicted RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 GPATCH1Q9BRR8 931 aaKnown RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 NAA11Q9BSU3 229 aaPredicted RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 PI4K2AQ9BTU6 479 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 TDRD1Q9BXT4 1180 aaKnown RBP3.48□□□□□ -1.85
SMC4-207ENST00000467263 ACTL8Q9H568 366 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 EGLN3Q9H6Z9 239 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 RPS10P5Q9NQ39 176 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 KLK13Q9UKR3 277 aa3.48□□□□□ -1.85
SMC4-207ENST00000467263 A8MXE2 369 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 F3P13726 295 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 MYL6BP14649 208 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 TCF4P15884 667 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 CAPN2P17655 700 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 ACAT1P24752 427 aaKnown RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 SHC1P29353 583 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 EEF1DP29692 281 aaKnown RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 MTCP1P56278 107 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 DCDC1P59894 354 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 TRA2AQ13595 282 aaKnown RBP eCLIP3.47□□□□□ -1.852e-6■■□□□ 11.9
SMC4-207ENST00000467263 ENPP7Q6UWV6 458 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 GPC2Q8N158 579 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 TCEANCQ8N8B7 351 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 CCDC89Q8N998 374 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 PYCR2Q96C36 320 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 PGM2Q96G03 612 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 CNDP2Q96KP4 475 aaKnown RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 SLC25A23Q9BV35 468 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 HOXD1Q9GZZ0 328 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 SDCBP2Q9H190 292 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 SNX25Q9H3E2 840 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 RIMS4Q9H426 269 aaPredicted RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 FN3KQ9H479 309 aa3.47□□□□□ -1.85
SMC4-207ENST00000467263 RAVER2Q9HCJ3 691 aaKnown RBP3.47□□□□□ -1.85
SMC4-207ENST00000467263 CCDC177Q9NQR7 707 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms