RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GPR34Q9UPC5 381 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 NUDCQ9Y266 331 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 DDX60LQ5H9U9 1706 aaKnown RBP3.04□□□□□ -1.92
XRN1-206ENST00000467077 SSC5DA1L4H1 1573 aa3.04□□□□□ -1.92
XRN1-206ENST00000467077 COL1A1P02452 1464 aaPredicted RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 MUC3AQ02505 3323 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 KIAA0100Q14667 2235 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 MYO3BQ8WXR4 1341 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 IGHV4-61A0A0C4DH41 118 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 DNM1LO00429 736 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 TO15178 435 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 DUS4LO95620 317 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 IGHV4-59P01825 116 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 RAF1P04049 648 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 LDHCP07864 332 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MMP9P14780 707 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 CREB5Q02930 508 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 LGALS3BPQ08380 585 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 PNRC1Q12796 327 aaPredicted RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 AIMP2Q13155 320 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 PRKG2Q13237 762 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 CAPRIN1Q14444 709 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 IRF3Q14653 427 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MELKQ14680 651 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 P2RY6Q15077 328 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 FAM98BQ52LJ0 330 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 CORO6Q6QEF8 472 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 INTS8Q75QN2 995 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 DNAJC22Q8N4W6 341 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 CPSF7Q8N684 471 aaKnown RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 ZNF383Q8NA42 475 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 OR1J1Q8NGS3 322 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 RAET1EQ8TD07 263 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 OPTNQ96CV9 577 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 ERLEC1Q96DZ1 483 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MTERF3Q96E29 417 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 CCDC34Q96HJ3 373 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MAGED4Q96JG8 741 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 FAM81BQ96LP2 452 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 SGK494Q96LW2 274 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MYADMQ96S97 322 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 PRO3102Q9H379 93 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 HRH4Q9H3N8 390 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 SYNCQ9H7C4 482 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 CHMP1AQ9HD42 196 aaPredicted RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 SWAP70Q9UH65 585 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 VPS28Q9UK41 221 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 ZNF215Q9UL58 517 aaPredicted RBP3.03□□□□□ -1.92
XRN1-206ENST00000467077 MYH13Q9UKX3 1938 aa3.03□□□□□ -1.92
XRN1-206ENST00000467077 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 IGLV9-49A0A0B4J1Y8 123 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 CCL15-CCL14A0A0B4J2E2 113 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 A0A1W2PRB8 838 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 CLRN2A0PK11 232 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 LRRC72A6NJI9 287 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 AGAP14A8MT82 685 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 K7ENM7 598 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 ZNF197O14709 1029 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 VILLO15195 856 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 CCL5P13501 91 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 ALOX12P18054 663 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 UGT1A4P22310 534 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 PSMB10P40306 273 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 MFAP4P55083 255 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 PRMT2P55345 433 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 UBXN2AP68543 259 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 MC1RQ01726 317 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 GPR17Q13304 367 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 CCL15Q16663 113 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 SGSM1Q2NKQ1 1148 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 CCDC152Q4G0S7 254 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 DUSP28Q4G0W2 176 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 GRTP1Q5TC63 336 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 LINGO4Q6UY18 593 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 SLC16A9Q7RTY1 509 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 ZNF554Q86TJ5 538 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 OLIG1Q8TAK6 271 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 U2AF1L4Q8WU68 220 aaKnown RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 HSD17B8Q92506 261 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 NSUN4Q96CB9 384 aaKnown RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 RSRC1Q96IZ7 334 aaKnown RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 RTN4RQ9BZR6 473 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 PPIL3Q9H2H8 161 aaKnown RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 SMARCAD1Q9H4L7 1026 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 ACKR4Q9NPB9 350 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 RHCGQ9UBD6 479 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 ADD3Q9UEY8 706 aaKnown RBP3.02□□□□□ -1.93
XRN1-206ENST00000467077 CDH23Q9H251 3354 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 FRMPD3Q5JV73 1810 aa3.02□□□□□ -1.93
XRN1-206ENST00000467077 XIRP2A4UGR9 3374 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 MED23Q9ULK4 1368 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 LNP1A1A4G5 178 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 KPNA7A9QM74 516 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 E9PI62 339 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 ATP6V0E1O15342 81 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 SSX4O60224 188 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 AP2A2O94973 939 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 ITIH1P19827 911 aa3.01□□□□□ -1.93
XRN1-206ENST00000467077 HOXD10P28358 340 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms