RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 UBA1P22314 1058 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 GALP22466 123 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 PTPN4P29074 926 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 HOXC9P31274 260 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RFC2P35250 354 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MDH1P40925 334 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 EPS15P42566 896 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 NPY4RP50391 375 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 CLCN4P51793 760 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 GALCP54803 685 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 PLTPP55058 493 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 NPRL3Q12980 569 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 CSTF3Q12996 717 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 AIMP2Q13155 320 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SNX1Q13596 522 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 EFTUD2Q15029 972 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RPS6KA1Q15418 735 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 COL24A1Q17RW2 1714 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 FUT11Q495W5 492 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 CDONQ4KMG0 1287 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 FBXO48Q5FWF7 155 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SPATA46Q5T0L3 261 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 FRG2Q64ET8 278 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 C18orf63Q68DL7 685 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 NOTUMQ6P988 496 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 FAM171BQ6P995 826 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 PET117Q6UWS5 81 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 NHLRC1Q6VVB1 395 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RAD9BQ6WBX8 426 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 ASB18Q6ZVZ8 466 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 DGLUCYQ7Z3D6 616 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MTERF4Q7Z6M4 381 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 NKAIN4Q8IVV8 208 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 DCUN1D3Q8IWE4 304 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 ELMOD2Q8IZ81 293 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 ADGRF2Q8IZF7 708 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 KRT222Q8N1A0 295 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 POMGNT2Q8NAT1 580 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 OR8K5Q8NH50 307 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 ACMSDQ8TDX5 336 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SCFD2Q8WU76 684 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SLC13A3Q8WWT9 602 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 DNAAF4Q8WXU2 420 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RAPGEF5Q92565 580 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 ARHGEF26Q96DR7 871 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SGF29Q96ES7 293 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 C11orf24Q96F05 449 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 GBP5Q96PP8 586 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 UHRF2Q96PU4 802 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RAB3IPQ96QF0 476 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MAP7D2Q96T17 732 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SH3GL1Q99961 368 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 GAL3ST1Q99999 423 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 DDX50Q9BQ39 737 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 TRMT61BQ9BVS5 477 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 CCSER1Q9C0I3 900 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 LRMDAQ9H2I8 198 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 UPF2Q9HAU5 1272 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MBNL1Q9NR56 388 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 IARS2Q9NSE4 1012 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 TMOD3Q9NYL9 352 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MRPL15Q9P015 296 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 SPATA7Q9P0W8 599 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 TUBE1Q9UJT0 475 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 CCPG1Q9ULG6 757 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 TRPV2Q9Y5S1 764 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 POMT1Q9Y6A1 747 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 TNRC18O15417 2968 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 RPRD2Q5VT52 1461 aaKnown RBP3.4□□□□□ -1.87
CCDC58-203ENST00000466854 PHLPP2Q6ZVD8 1323 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 MYO3BQ8WXR4 1341 aa3.4□□□□□ -1.87
CCDC58-203ENST00000466854 KIAA1107Q9UPP5 1409 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 EIF4E1BA6NMX2 242 aaKnown RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 H0YCG3 227 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 P2RY10O00398 339 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 WDR46O15213 610 aaKnown RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 ZNHIT1O43257 154 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 NDUFS3O75489 264 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 SMC2O95347 1197 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 DIRAS3O95661 229 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 FGF4P08620 206 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 MYBL1P10243 752 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 PRG2P13727 222 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 GLRA2P23416 452 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 RDXP35241 583 aaKnown RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 PPARGP37231 505 aaPredicted RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 BNIP1Q12981 228 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 HNRNPDQ14103 355 aaKnown RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 PNLIPRP3Q17RR3 467 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 CCDC152Q4G0S7 254 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 C9orf152Q5JTZ5 239 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 KRT80Q6KB66 452 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 BRAT1Q6PJG6 821 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 CORO6Q6QEF8 472 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 ZNF852Q6ZMS4 543 aa3.39□□□□□ -1.87
CCDC58-203ENST00000466854 RBPMS2Q6ZRY4 209 aaKnown RBP3.39□□□□□ -1.87
CCDC58-203ENST00000466854 ARMCX2Q7L311 632 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms