RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 EBNA1BP2Q99848 306 aaKnown RBP18.19■□□□□ 0.5
COL9A3-206ENST00000466532 TGIF2Q9GZN2 237 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 MAD1L1Q9Y6D9 718 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 COMMD10Q9Y6G5 202 aa18.19■□□□□ 0.5
COL9A3-206ENST00000466532 ITPR2Q14571 2701 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 A0A1W2PQ72 361 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 DYTNA2CJ06 578 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 SERPINA7P05543 415 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 UQCRHP07919 91 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 IMPA1P29218 277 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 SOX11P35716 441 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 COILP38432 576 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 SKIV2L2P42285 1042 aaKnown RBP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 MPP1Q00013 466 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 RPUSD3Q6P087 351 aaKnown RBP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 UBE2R2Q712K3 238 aaPredicted RBP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 PIWIL4Q7Z3Z4 852 aaKnown RBP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 AGGF1Q8N302 714 aaeCLIP18.18■□□□□ 0.5
COL9A3-206ENST00000466532 SIRT6Q8N6T7 355 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 CALML6Q8TD86 181 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 PBKQ96KB5 322 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 RIC8BQ9NVN3 520 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 PLA2G3Q9NZ20 509 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 OSGIN2Q9Y236 505 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
COL9A3-206ENST00000466532 CELSR2Q9HCU4 2923 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 H7BY64 318 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 PCDH17O14917 1159 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 LRRTM2O43300 516 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 HAUS5O94927 633 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 BMP10O95393 424 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 STATHP02808 62 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 CELA2AP08217 269 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 DCTP40126 519 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 MAGEA3P43357 314 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 AVPR1BP47901 424 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 MAT1AQ00266 395 aaKnown RBP18.17■□□□□ 0.5
COL9A3-206ENST00000466532 FAM53BQ14153 422 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 CYP1B1Q16678 543 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 NDUFA9Q16795 377 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 ZC3H7AQ8IWR0 971 aaKnown RBP18.17■□□□□ 0.5
COL9A3-206ENST00000466532 SIGLEC10Q96LC7 697 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 MAGEB10Q96LZ2 347 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-206ENST00000466532 PRAP1Q96NZ9 151 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 CCDC177Q9NQR7 707 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-206ENST00000466532 OLAHQ9NV23 265 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 FBXO5Q9UKT4 447 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 MKL2Q9ULH7 1088 aa18.17■□□□□ 0.5
COL9A3-206ENST00000466532 MRPS2Q9Y399 296 aaKnown RBP18.17■□□□□ 0.5
COL9A3-206ENST00000466532 LOC102723996A0A087X1L8 192 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 NRDCO43847 1150 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 WFS1O76024 890 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 PER3P56645 1201 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 PCOLCEQ15113 449 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 HSP90AA5PQ58FG0 334 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 TMEM205Q6UW68 189 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 RIPOR1Q6ZS17 1223 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 BCORP1Q8N888 145 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 NAT8LQ8N9F0 302 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 NAP1L3Q99457 506 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-206ENST00000466532 SLX1AQ9BQ83 275 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 FAM167BQ9BTA0 163 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 AARSD1Q9BTE6 412 aaKnown RBP18.16■□□□□ 0.5
COL9A3-206ENST00000466532 ZNF700Q9H0M5 742 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 TMEM184CQ9NVA4 438 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 JRKLQ9Y4A0 524 aa18.16■□□□□ 0.5
COL9A3-206ENST00000466532 NOTCH2Q04721 2471 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 TRAV17A0A0B4J275 112 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 PGRMC1O00264 195 aaKnown RBP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 EIF3FO00303 357 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 F10P00742 488 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 TNFSF10P50591 281 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 EFNA3P52797 238 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 TBPL1P62380 186 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 AP2B1P63010 937 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 SNRPNP63162 240 aaKnown RBP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 OR9A4Q8NGU2 314 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 HAS2Q92819 552 aa18.15■□□□□ 0.5
COL9A3-206ENST00000466532 IARS2Q9NSE4 1012 aaKnown RBP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 TRMT6Q9UJA5 497 aaKnown RBP18.15■□□□□ 0.5
COL9A3-206ENST00000466532 MYO7BQ6PIF6 2116 aa18.14■□□□□ 0.5
COL9A3-206ENST00000466532 H0YIG0 161 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 JRKO75564 520 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 C8orf89P0DMQ9 161 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 ITGAMP11215 1152 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 ICAM2P13598 275 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 HRH2P25021 359 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 RPS15AP62244 130 aaKnown RBP18.14■□□□□ 0.49
COL9A3-206ENST00000466532 PTK6Q13882 451 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 MFSD4BQ5TF39 518 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 LRRC8EQ6NSJ5 796 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 UGT3A1Q6NUS8 523 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 VN1R4Q7Z5H5 301 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 PPIL6Q8IXY8 311 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 AMER2Q8N7J2 671 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 MCOLN3Q8TDD5 553 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 GRK7Q8WTQ7 553 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 METTL21AQ8WXB1 218 aa18.14■□□□□ 0.49
COL9A3-206ENST00000466532 NDNQ99608 321 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms