RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SMIM23A6NLE4 172 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ERVH48-1M5A8F1 160 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 HAT1O14929 419 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 CREG1O75629 220 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 CAPN1P07384 714 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 NPPBP16860 134 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 KRT15P19012 456 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 CCND1P24385 295 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ARSFP54793 590 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 DCDP81605 110 aaKnown RBP16.28■□□□□ 0.2
VPS52-215ENST00000464425 DLG1Q12959 904 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 CASP8Q14790 479 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ACAP2Q15057 778 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 DEFB109BQ30KR1 87 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 MLIPQ5VWP3 458 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 FAM198BQ6UWH4 519 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 LCTLQ6UWM7 567 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 FRA10AC1Q70Z53 315 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ADAMTSL2Q86TH1 951 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ISCA2Q86U28 154 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 C17orf64Q86WR6 236 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 OR56A3Q8NH54 315 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 PROKR1Q8TCW9 393 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ATL1Q8WXF7 558 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 ZIM3Q96PE6 472 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 GBP5Q96PP8 586 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 DPH2Q9BQC3 489 aaPredicted RBP16.28■□□□□ 0.2
VPS52-215ENST00000464425 NLNQ9BYT8 704 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 VPS11Q9H270 941 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 CUTCQ9NTM9 273 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 TMEM184CQ9NVA4 438 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 OARD1Q9Y530 152 aa16.28■□□□□ 0.2
VPS52-215ENST00000464425 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 HEATR5BQ9P2D3 2071 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 HYKKA2RU49 373 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 NCF1BA6NI72 391 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 NCF1CA8MVU1 366 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 C9J4A7 227 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 STATHP02808 62 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 ITGB2P05107 769 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 ANXA5P08758 320 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 FURINP09958 794 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 RAB40ALP0C0E4 278 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 CDH1P12830 882 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 NCF1P14598 390 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 EZRP15311 586 aaKnown RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 GCGRP47871 477 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 CDKL1Q00532 357 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 IRF9Q00978 393 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 OR4D1Q15615 310 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 TSNAXIP1Q2TAA8 658 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 C18orf21Q32NC0 220 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 LINC00303Q3SY05 128 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 KLC3Q6P597 504 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 SH2D5Q6ZV89 423 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 DTWD1Q8N5C7 304 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 METTL27Q8N6F8 245 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 CSNK1A1LQ8N752 337 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 RHEBL1Q8TAI7 183 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 STAG3L4Q8TBR4 150 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 KCTD4Q8WVF5 259 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 RERGQ96A58 199 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 PTERQ96BW5 349 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 NXNL1Q96CM4 212 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 GPR78Q96P69 363 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 OR2A5Q96R48 311 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 OR4K3Q96R72 315 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 HAUS8Q9BT25 410 aa16.27■□□□□ 0.2
VPS52-215ENST00000464425 GPN3Q9UHW5 284 aaPredicted RBP16.27■□□□□ 0.2
VPS52-215ENST00000464425 CACNA1GO43497 2377 aa16.27■□□□□ 0.19
VPS52-215ENST00000464425 A0A1B0GX78 115 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 A0A1W2PPM1 405 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 FEZF1A0PJY2 475 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 FITM1A5D6W6 292 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 DSCR3O14972 297 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 ATXN7O15265 892 aaPredicted RBP16.26■□□□□ 0.19
VPS52-215ENST00000464425 MED26O95402 600 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 HRH2P25021 359 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 CSNK1G2P78368 415 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 LY6DQ14210 128 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 NCF4Q15080 339 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 HKDC1Q2TB90 917 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 FAM214AQ32MH5 1076 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 KRT71Q3SY84 523 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 NKAIN1Q4KMZ8 207 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 CDKL4Q5MAI5 379 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 BORAQ6PGQ7 559 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 HDXQ7Z353 690 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 GPSM1Q86YR5 675 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.26■□□□□ 0.19
VPS52-215ENST00000464425 CATSPER2Q96P56 530 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 ARHGAP9Q9BRR9 750 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 IFT80Q9P2H3 777 aaPredicted RBP16.26■□□□□ 0.19
VPS52-215ENST00000464425 DCDC2Q9UHG0 476 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 TCFL5Q9UL49 500 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 SLC22A14Q9Y267 594 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 ATMQ13315 3056 aa16.26■□□□□ 0.19
VPS52-215ENST00000464425 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 UQCRHP07919 91 aa16.25■□□□□ 0.19
VPS52-215ENST00000464425 GSTA1P08263 222 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms