RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CDK6Q00534 326 aa8.81□□□□□ -1
HPS4-208ENST00000464362 DEFB115Q30KQ5 88 aa8.81□□□□□ -1
HPS4-208ENST00000464362 IQCCQ4KMZ1 466 aa8.81□□□□□ -1
HPS4-208ENST00000464362 PSRC1Q6PGN9 363 aaPredicted RBP8.81□□□□□ -1
HPS4-208ENST00000464362 DPY19L3Q6ZPD9 716 aa8.81□□□□□ -1
HPS4-208ENST00000464362 IQCHQ86VS3 1027 aa8.81□□□□□ -1
HPS4-208ENST00000464362 FAM217AQ8IXS0 508 aa8.81□□□□□ -1
HPS4-208ENST00000464362 ANKFN1Q8N957 763 aa8.81□□□□□ -1
HPS4-208ENST00000464362 DTX3Q8N9I9 347 aa8.81□□□□□ -1
HPS4-208ENST00000464362 LMNTD1Q8N9Z9 388 aa8.81□□□□□ -1
HPS4-208ENST00000464362 AQP11Q8NBQ7 271 aa8.81□□□□□ -1
HPS4-208ENST00000464362 KREMEN2Q8NCW0 462 aa8.81□□□□□ -1
HPS4-208ENST00000464362 KLHDC9Q8NEP7 349 aa8.81□□□□□ -1
HPS4-208ENST00000464362 OR8D1Q8WZ84 308 aa8.81□□□□□ -1
HPS4-208ENST00000464362 CXorf40BQ96DE9 158 aa8.81□□□□□ -1
HPS4-208ENST00000464362 SSNA1O43805 119 aa8.81□□□□□ -1
HPS4-208ENST00000464362 STC2O76061 302 aa8.81□□□□□ -1
HPS4-208ENST00000464362 ATE1O95260 518 aa8.81□□□□□ -1
HPS4-208ENST00000464362 GALTP07902 379 aa8.81□□□□□ -1
HPS4-208ENST00000464362 EBLN1P0CF75 366 aa8.81□□□□□ -1
HPS4-208ENST00000464362 C8orf89P0DMQ9 161 aa8.81□□□□□ -1
HPS4-208ENST00000464362 BMP2P12643 396 aa8.81□□□□□ -1
HPS4-208ENST00000464362 HTR1EP28566 365 aa8.81□□□□□ -1
HPS4-208ENST00000464362 HLCSP50747 726 aa8.81□□□□□ -1
HPS4-208ENST00000464362 BMXP51813 675 aa8.81□□□□□ -1
HPS4-208ENST00000464362 SMIM11AP58511 58 aa8.81□□□□□ -1
HPS4-208ENST00000464362 RPL26P61254 145 aaKnown RBP8.81□□□□□ -1
HPS4-208ENST00000464362 TEAD4Q15561 434 aa8.81□□□□□ -1
HPS4-208ENST00000464362 DUOXA1Q1HG43 343 aa8.81□□□□□ -1
HPS4-208ENST00000464362 CYBRD1Q53TN4 286 aa8.81□□□□□ -1
HPS4-208ENST00000464362 LCN8Q6JVE9 175 aa8.81□□□□□ -1
HPS4-208ENST00000464362 CEACAM20Q6UY09 585 aa8.81□□□□□ -1
HPS4-208ENST00000464362 TPRG1Q6ZUI0 275 aa8.81□□□□□ -1
HPS4-208ENST00000464362 METTL3Q86U44 580 aaKnown RBP8.81□□□□□ -1
HPS4-208ENST00000464362 ZFAND4Q86XD8 727 aa8.81□□□□□ -1
HPS4-208ENST00000464362 APCDD1Q8J025 514 aa8.81□□□□□ -1
HPS4-208ENST00000464362 DOK4Q8TEW6 326 aa8.81□□□□□ -1
HPS4-208ENST00000464362 TMEM125Q96AQ2 219 aa8.81□□□□□ -1
HPS4-208ENST00000464362 INPP5KQ9BT40 448 aa8.81□□□□□ -1
HPS4-208ENST00000464362 SEZ6LQ9BYH1 1024 aa8.81□□□□□ -1
HPS4-208ENST00000464362 MAPRE3Q9UPY8 281 aa8.81□□□□□ -1
HPS4-208ENST00000464362 DLGAP4Q9Y2H0 992 aa8.81□□□□□ -1
HPS4-208ENST00000464362 PCDHGB5Q9Y5G0 923 aa8.81□□□□□ -1
HPS4-208ENST00000464362 SEC16AO15027 2179 aa8.81□□□□□ -1
HPS4-208ENST00000464362 NINQ8N4C6 2090 aa8.81□□□□□ -1
HPS4-208ENST00000464362 FABP12A6NFH5 140 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
HPS4-208ENST00000464362 H3BMQ9 156 aa8.8□□□□□ -1
HPS4-208ENST00000464362 RTCAO00442 366 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 SMAD6O43541 496 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 TLX2O43763 284 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 OR10H2O60403 315 aa8.8□□□□□ -1
HPS4-208ENST00000464362 HLA-DQA2P01906 255 aa8.8□□□□□ -1
HPS4-208ENST00000464362 LCKP06239 509 aa8.8□□□□□ -1
HPS4-208ENST00000464362 HSD17B1P14061 328 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ATP1B2P14415 290 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 KDELR2P33947 212 aa8.8□□□□□ -1
HPS4-208ENST00000464362 GRIA2P42262 883 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ARCN1P48444 511 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 PGFP49763 221 aa8.8□□□□□ -1
HPS4-208ENST00000464362 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 MLLT10P55197 1068 aa8.8□□□□□ -1
HPS4-208ENST00000464362 RPP38P78345 283 aaKnown RBP8.8□□□□□ -1
HPS4-208ENST00000464362 TLE2Q04725 743 aa8.8□□□□□ -1
HPS4-208ENST00000464362 FPGSQ05932 587 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TMEM126BQ8IUX1 230 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF461Q8TAF7 563 aa8.8□□□□□ -1
HPS4-208ENST00000464362 COG8Q96MW5 612 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZFP3Q96NJ6 502 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 TRPV5Q9NQA5 729 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZDHHC7Q9NXF8 308 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TMEM181Q9P2C4 612 aa8.8□□□□□ -1
HPS4-208ENST00000464362 FBXO9Q9UK97 447 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 OR10H1Q9Y4A9 318 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SLX4Q8IY92 1834 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SH3PXD2BA1X283 911 aa8.8□□□□□ -1
HPS4-208ENST00000464362 C1QTNF3-AMACRE9PGA6 284 aa8.8□□□□□ -1
HPS4-208ENST00000464362 PLK4O00444 970 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
HPS4-208ENST00000464362 MUSKO15146 869 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ACOX3O15254 700 aa8.8□□□□□ -1
HPS4-208ENST00000464362 GUCY1B2O75343 617 aa8.8□□□□□ -1
HPS4-208ENST00000464362 FCER2P06734 321 aa8.8□□□□□ -1
HPS4-208ENST00000464362 STSP08842 583 aa8.8□□□□□ -1
HPS4-208ENST00000464362 FAM163BP0C2L3 166 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ETV3P41162 512 aa8.8□□□□□ -1
HPS4-208ENST00000464362 SELPLGQ14242 412 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ZNF404Q494X3 552 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ANKDD1AQ495B1 522 aa8.8□□□□□ -1
HPS4-208ENST00000464362 CARD16Q5EG05 197 aa8.8□□□□□ -1
HPS4-208ENST00000464362 FOXB2Q5VYV0 432 aa8.8□□□□□ -1
HPS4-208ENST00000464362 GDPD4Q6W3E5 623 aa8.8□□□□□ -1
HPS4-208ENST00000464362 RNF130Q86XS8 419 aa8.8□□□□□ -1
HPS4-208ENST00000464362 NETO1Q8TDF5 533 aa8.8□□□□□ -1
HPS4-208ENST00000464362 TFAP2CQ92754 450 aa8.8□□□□□ -1
HPS4-208ENST00000464362 IL17FQ96PD4 163 aa8.8□□□□□ -1
HPS4-208ENST00000464362 HTATIP2Q9BUP3 242 aa8.8□□□□□ -1
HPS4-208ENST00000464362 ANKRD60Q9BZ19 345 aa8.8□□□□□ -1
HPS4-208ENST00000464362 OCEL1Q9H607 264 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms