RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 YBEYP58557 167 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CRADDP78560 199 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GUCY2DQ02846 1103 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GPS1Q13098 491 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MSLNQ13421 630 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 XRCC4Q13426 336 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GALNT3Q14435 633 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KCNJ11Q14654 390 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PTPRCAPQ14761 206 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CLCA4Q14CN2 919 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PDK1Q15118 436 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DLG2Q15700 870 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 P3H1Q32P28 736 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TEX44Q53QW1 395 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PCID2Q5JVF3 399 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FNBP1LQ5T0N5 605 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RNASEH2BQ5TBB1 312 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF626Q68DY1 528 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KCTD11Q693B1 232 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 C8orf74Q6P047 294 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DPY19L3Q6ZPD9 716 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RFLNAQ6ZTI6 216 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SLC29A4Q7RTT9 530 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KDELC2Q7Z4H8 507 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DTX2Q86UW9 622 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TRIM69Q86WT6 500 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MMAAQ8IVH4 418 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KLHDC8BQ8IXV7 354 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CEP112Q8N8E3 955 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NAT8LQ8N9F0 302 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 OR2A12Q8NGT7 310 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 WDR36Q8NI36 951 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FBXO25Q8TCJ0 367 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GANCQ8TET4 914 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SLCO2A1Q92959 643 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 R3HDM4Q96D70 268 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 IMP4Q96G21 291 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 LRGUKQ96M69 825 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GDAP1L1Q96MZ0 367 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TRIB3Q96RU7 358 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DDX50Q9BQ39 737 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 MGME1Q9BQP7 344 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ABCG4Q9H172 646 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GBA3Q9H227 469 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 ADNPQ9H2P0 1102 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NOD2Q9HC29 1040 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GLOD4Q9HC38 313 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 PCDH9Q9HC56 1237 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 EPB41L5Q9HCM4 733 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 SARS2Q9NP81 518 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 NLGN3Q9NZ94 848 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 KLHL8Q9P2G9 620 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 RNF14Q9UBS8 474 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 UBA2Q9UBT2 640 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 HS3ST2Q9Y278 367 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DRG1Q9Y295 367 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 CSNK1G3Q9Y6M4 447 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 DOPEY1Q5JWR5 2465 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3DA0A087WVF3 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3IA0A087WXS9 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3EA0A087X179 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3KA0A087X1G2 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3FA6NER0 549 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 NEMP2A6NFY4 417 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 EFCAB8A8MWE9 144 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 HACD1B0YJ81 288 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3LB9A6J9 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CCL22O00626 93 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TRAFD1O14545 582 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 DNALI1O14645 258 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 NVLO15381 856 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 SLC7A4O43246 635 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CTIFO43310 598 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 AP1G1O43747 822 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PMPCBO75439 489 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 GCATO75600 419 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PIAS1O75925 651 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 SEC31AO94979 1220 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 NXPH3O95157 252 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TBC1D3HP0C7X1 549 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PIRTP0C851 137 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TPH1P17752 444 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 POLR2EP19388 210 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 SLC5A2P31639 672 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 DRD3P35462 400 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CD86P42081 329 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CCNHP51946 323 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PDX1P52945 283 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 UCP3P55916 312 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 RHOAP61586 193 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CYP4F2P78329 520 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 BASP1P80723 227 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 ECT2LQ008S8 904 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 SRSF6Q13247 344 aaKnown RBP3.55□□□□□ -1.84
SCFD1-204ENST00000463622 SEMA5AQ13591 1074 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 TGIF1Q15583 401 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 C3orf38Q5JPI3 329 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 CEP78Q5JTW2 689 aa3.55□□□□□ -1.84
SCFD1-204ENST00000463622 PRAMEF17Q5VTA0 474 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms