RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SOHLH2Q9NX45 425 aa13.06□□□□□ -0.32
SCAMP4-206ENST00000460767 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-206ENST00000460767 IKZF3Q9UKT9 509 aa13.06□□□□□ -0.32
SCAMP4-206ENST00000460767 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
SCAMP4-206ENST00000460767 MDC1Q14676 2089 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-206ENST00000460767 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 FAM95CA0A1B0GW59 222 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 SLC16A5O15375 505 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 CATP04040 527 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 MAGP20916 626 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 IMPA1P29218 277 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 HSD17B2P37059 387 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 YBX1P67809 324 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 RAPSNQ13702 412 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 PHKG1Q16816 387 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 KBTBD12Q3ZCT8 623 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 PRAMEF17Q5VTA0 474 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 FAM69BQ5VUD6 431 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 FCRL6Q6DN72 434 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 FAM20CQ8IXL6 584 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 OR2L3Q8NG85 312 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 OR1L3Q8NH93 324 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 FAR1Q8WVX9 515 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 RELTQ969Z4 430 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 RBBP8Q99708 897 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 NOVA2Q9UNW9 492 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-206ENST00000460767 HMX2A2RU54 273 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 C8GP07360 202 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 CTSBP07858 339 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 CYP2A7P20853 494 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 AGXTP21549 392 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 PSMB5P28074 263 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 GP5P40197 560 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 GRIA3P42263 894 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 GLRBP48167 497 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 RGS4P49798 205 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 PNLIPRP1P54315 467 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 RELAQ04206 551 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 NAB1Q13506 487 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 ZNF425Q6IV72 752 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 TTC23LQ6PF05 361 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 ANKRD49Q8WVL7 239 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 LINGO1Q96FE5 620 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 TXLNGYQ9BZA5 131 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 SYNPO2LQ9H987 977 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 PARVBQ9HBI1 364 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 NINJ2Q9NZG7 142 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 OSGIN2Q9Y236 505 aa13.04□□□□□ -0.32
SCAMP4-206ENST00000460767 ISM1B1AKI9 464 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 TMEM150CB9EJG8 249 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 E7EQ34 232 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 PEX12O00623 359 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 ZBTB14O43829 449 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 ZNF500O60304 480 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 NRP2O60462 931 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 CTSVO60911 334 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 ONECUT2O95948 504 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 OTX2P32243 289 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 FOLR3P41439 243 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 IL2P60568 153 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 POU4F1Q01851 419 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 ZNF460Q14592 562 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 TESK1Q15569 626 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 PTCHD3Q3KNS1 767 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 CAPN12Q6ZSI9 719 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 UBE2R2Q712K3 238 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 C2orf73Q8N5S3 287 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 GPATCH11Q8N954 259 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 OR2Y1Q8NGV0 311 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 PROKR1Q8TCW9 393 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 GRHL3Q8TE85 626 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SKA2Q8WVK7 121 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SMPDL3AQ92484 453 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 CDKL2Q92772 493 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 UBXN10Q96LJ8 280 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 FMO2Q99518 471 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SGPP1Q9BX95 441 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 ACSS3Q9H6R3 686 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SLC6A20Q9NP91 592 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 CHST11Q9NPF2 352 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 P4HTMQ9NXG6 502 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 STOX2Q9P2F5 926 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 SERTAD3Q9UJW9 196 aa13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 MTO1Q9Y2Z2 717 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 PRRC2CQ9Y520 2896 aaKnown RBP13.03□□□□□ -0.32
SCAMP4-206ENST00000460767 POLQO75417 2590 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms