RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
SOX2-OT-201ENST00000460739 ASF1BQ9NVP2 202 aa11.22□□□□□ -0.61
SOX2-OT-201ENST00000460739 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
SOX2-OT-201ENST00000460739 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
SOX2-OT-201ENST00000460739 A0A0A6YYC8 382 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 BLACEA4D250 179 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 I3L1I5 382 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 SEMA7AO75326 666 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 AGFG2O95081 481 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 CBX6O95503 412 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 TSPAN12O95859 305 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 ANXA5P08758 320 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 COX6A1P12074 109 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 CCND1P24385 295 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 EMP2P54851 167 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 RPS15AP62244 130 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 MRPL49Q13405 166 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 HIF1AQ16665 826 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 NDUFA9Q16795 377 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 BBS9Q3SYG4 887 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 HIBCHQ6NVY1 386 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 NDUFAF7Q7L592 441 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 VN1R4Q7Z5H5 301 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 CREG2Q8IUH2 290 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 PDIK1LQ8N165 341 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 MYO1HQ8N1T3 1032 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 C8orf44Q96CB5 159 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 LRRC39Q96DD0 335 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 RUNDC3BQ96NL0 473 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 WDR83Q9BRX9 315 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 SGPP1Q9BX95 441 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 EPS8L2Q9H6S3 715 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 CORO1CQ9ULV4 474 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 CSAG2Q9Y5P2 127 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 COPG1Q9Y678 874 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 TEX264Q9Y6I9 313 aa11.21□□□□□ -0.61
SOX2-OT-201ENST00000460739 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 LOC102723996A0A087X1L8 192 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 IGHV1-45A0A0A0MS14 117 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 NSG1A0A0A6YYJ2 146 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 H0YIG0 161 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 FFAR3O14843 346 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 GPR42O15529 346 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 CXCR2P25025 360 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 ELK3P41970 407 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 TSFMP43897 325 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 AVPR1BP47901 424 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 GLRBP48167 497 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 IL2P60568 153 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 SNRPNP63162 240 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 CSNK1G2P78368 415 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 DR1Q01658 176 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 MFAP5Q13361 173 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 FRG1Q14331 258 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 NR6A1Q15406 480 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 PHKG1Q16816 387 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 EIF2S3LQ2VIR3 472 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 B3GNTL1Q67FW5 361 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 STEAP4Q687X5 459 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 LCTLQ6UWM7 567 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 ISLR2Q6UXK2 745 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 MBOAT1Q6ZNC8 495 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 C17orf64Q86WR6 236 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 ZC3H7AQ8IWR0 971 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 KBTBD2Q8IY47 623 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 DNAJB14Q8TBM8 379 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 SSC4DQ8WTU2 575 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 TM4SF19Q96DZ7 209 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 LINGO1Q96FE5 620 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 CAPZA3Q96KX2 299 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 LMF1Q96S06 567 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 YIPF2Q9BWQ6 316 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 ATG10Q9H0Y0 220 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 LRRC4CQ9HCJ2 640 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 PPANQ9NQ55 473 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 SLC17A6Q9P2U8 582 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 CHMP2BQ9UQN3 213 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 SH2B3Q9UQQ2 575 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 NTNG1Q9Y2I2 539 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 MRPS2Q9Y399 296 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 NBPF19A0A087WUL8 3843 aa11.2□□□□□ -0.62
SOX2-OT-201ENST00000460739 CCDC188H7C350 402 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 TP73O15350 636 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 KLHL18O94889 574 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 BMP10O95393 424 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 NSA2O95478 260 aaKnown RBP11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 SERPINA7P05543 415 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 HEXBP07686 556 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 HIST1H2AGP0C0S8 130 aaPredicted RBP11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 PRR35P0CG20 571 aa11.19□□□□□ -0.62
SOX2-OT-201ENST00000460739 NPPBP16860 134 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms