RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 NXPE4Q6UWF7 544 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SLC22A9Q8IVM8 553 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 PTGR2Q8N8N7 351 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-209ENST00000460573 BANPQ8N9N5 519 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SNX31Q8N9S9 440 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 ESAMQ96AP7 390 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 APOPT1Q96IL0 206 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 PKNOX2Q96KN3 472 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SELENOSQ9BQE4 189 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SARGQ9BW04 601 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 STMN4Q9H169 189 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-209ENST00000460573 EHD1Q9H4M9 534 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 FOXJ2Q9P0K8 574 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 PCDHB3Q9Y5E6 796 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 AP1M2Q9Y6Q5 423 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 KCNE1BA0A087WTH5 132 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 GOLGA6L10A6NI86 522 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-209ENST00000460573 H2AFYO75367 372 aaKnown RBP21.5■■□□□ 1.03
C9orf3-209ENST00000460573 OR2B3O76000 313 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 HBQ1P09105 142 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 EPB42P16452 691 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 ATP5F1P24539 256 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-209ENST00000460573 CXCR2P25025 360 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 AGTR2P50052 363 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 NFKB2Q00653 900 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 FBXO48Q5FWF7 155 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 ATG9BQ674R7 924 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 PWWP2BQ6NUJ5 590 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 TMEM126BQ8IUX1 230 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 RDH11Q8TC12 318 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 PMEPA1Q969W9 287 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 PHF21BQ96EK2 531 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 ZNF285Q96NJ3 590 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 SPRY4Q9C004 299 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 CPNE5Q9HCH3 593 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 MID2Q9UJV3 735 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 TMEM184BQ9Y519 407 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-209ENST00000460573 ANGPTL3Q9Y5C1 460 aa21.5■■□□□ 1.03
C9orf3-209ENST00000460573 PTPRQQ9UMZ3 2332 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 H3BMH7 237 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 STMND1H3BQB6 276 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 TXNDC9O14530 226 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 HAT1O14929 419 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 HCRTR1O43613 425 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 PLIN3O60664 434 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 KATNA1O75449 491 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 SCRG1O75711 98 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 C1GALT1C1LP0DN25 315 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 PCDH1Q08174 1060 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 MAP7Q14244 749 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 TNFAIP8L3Q5GJ75 292 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 CATSPEREQ5SY80 951 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 YOD1Q5VVQ6 348 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-209ENST00000460573 HDXQ7Z353 690 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 TMPRSS11BQ86T26 416 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 SLC39A7Q92504 469 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 RERGQ96A58 199 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-209ENST00000460573 CCDC126Q96EE4 140 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 OR2A5Q96R48 311 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 AIF1LQ9BQI0 150 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 ULBP3Q9BZM4 244 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 PITHD1Q9GZP4 211 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-209ENST00000460573 CENPHQ9H3R5 247 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 EMCNQ9ULC0 261 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 ACTL7BQ9Y614 415 aa21.49■■□□□ 1.03
C9orf3-209ENST00000460573 TRBC2A0A5B9 178 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 A8MT66 165 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 ZSCAN9O15535 394 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 NRP2O60462 931 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 CPNE3O75131 537 aaKnown RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 STK17BO94768 372 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 PROCP04070 461 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 CASP2P42575 452 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 SLCO4C1Q6ZQN7 724 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 KRT78Q8N1N4 520 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 TEX9Q8N6V9 391 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 PTCD3Q96EY7 689 aaKnown RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 BBC3Q96PG8 261 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 C1QTNF3Q9BXJ4 246 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 SPRTNQ9H040 489 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 SSU72Q9NP77 194 aaKnown RBP21.48■■□□□ 1.03
C9orf3-209ENST00000460573 IRAK4Q9NWZ3 460 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 SRPK3Q9UPE1 567 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 PLLPQ9Y342 182 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 ASB1Q9Y576 335 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 NBEAQ8NFP9 2946 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 ITPR1Q14643 2758 aa21.48■■□□□ 1.03
C9orf3-209ENST00000460573 FITM1A5D6W6 292 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 H0YGG7 62 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 ATXN7O15265 892 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 DLX3O60479 287 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 KIAA0754O94854 1291 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 DLGAP3O95886 979 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 EEF1DP29692 281 aaKnown RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 ARSFP54793 590 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 VSX2P58304 361 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 ARF3P61204 181 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-209ENST00000460573 REEP5Q00765 189 aa21.47■■□□□ 1.03
C9orf3-209ENST00000460573 VAC14Q08AM6 782 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms