RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 FOLH1Q04609 750 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 MSLNQ13421 630 aaPredicted RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 GRB7Q14451 532 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CEBPEQ15744 281 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 EXT1Q16394 746 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PARP6Q2NL67 630 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CCSMST1Q4G0I0 132 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 GARNL3Q5VVW2 1013 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PLAG1Q6DJT9 500 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 SUSD1Q6UWL2 747 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 Q6ZPB1 254 aaPredicted RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 CPEB2Q7Z5Q1 589 aaKnown RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 DOLPP1Q86YN1 238 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 ZC3H7AQ8IWR0 971 aaKnown RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 CPSF7Q8N684 471 aaKnown RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 AMER2Q8N7J2 671 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 AMER3Q8N944 861 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 FAM71DQ8N9W8 422 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 MDS2Q8NDY4 140 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 OR2A1Q8NGT9 310 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 OR4L1Q8NH43 312 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 LKAAEAR1Q8TD35 194 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 ASB5Q8WWX0 329 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 HDAC10Q969S8 669 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 TMEM125Q96AQ2 219 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 RBCK1Q9BYM8 510 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 OSBPL8Q9BZF1 889 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 ARNT2Q9HBZ2 717 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 ABHD10Q9NUJ1 306 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 SPATA7Q9P0W8 599 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 HCN3Q9P1Z3 774 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 TAC3Q9UHF0 121 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PCYOX1Q9UHG3 505 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 EDARQ9UNE0 448 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 NFS1Q9Y697 457 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 GTF3C1Q12789 2109 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 A0A1W2PQ72 361 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 OR2A25A4D2G3 310 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 SOWAHDA6NJG2 315 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TMEM200CA6NKL6 621 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 NDC80O14777 642 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 KPNA5O15131 536 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 PJA2O43164 708 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 PSMD3O43242 534 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 NDUFS3O75489 264 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CDC123O75794 336 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 FAM155BO75949 473 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 C1orf105O95561 183 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 SYF2O95926 243 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 EZRP15311 586 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 PTGER1P34995 402 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 RFC3P40938 356 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 XCR1P46094 333 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TTPAP49638 278 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 AGTR2P50052 363 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 EIF3BP55884 814 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 COPS2P61201 443 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CDH17Q12864 832 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 ASTE1Q2TB18 679 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 PRTGQ2VWP7 1150 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 FBXW10Q5XX13 1052 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TMEM211Q6ICI0 200 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 SLC25A25Q6KCM7 469 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 PAPD4Q6PIY7 484 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 TMEM205Q6UW68 189 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 LDB1Q86U70 411 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 TGIF2LYQ8IUE0 185 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CLYBLQ8N0X4 340 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 PPHLN1Q8NEY8 458 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 OR52K1Q8NGK4 314 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 OR5M3Q8NGP4 307 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 OR9A4Q8NGU2 314 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 ZCCHC10Q8TBK6 192 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 FAM57AQ8TBR7 257 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 RND1Q92730 232 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 KRT35Q92764 455 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 FAM136AQ96C01 138 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 RMND5BQ96G75 393 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 SCMH1Q96GD3 660 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 IMMP1LQ96LU5 166 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CYTH2Q99418 400 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 DNAJC7Q99615 494 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CHP1Q99653 195 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 LPAR4Q99677 370 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TRIM51Q9BSJ1 452 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TMEM121Q9BTD3 319 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CARD6Q9BX69 1037 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 POLDIP3Q9BY77 421 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 UCK2Q9BZX2 261 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 TGIF2Q9GZN2 237 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 VN1R1Q9GZP7 353 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 SLC24A3Q9HC58 644 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 FAM114A2Q9NRY5 505 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 CCM2LQ9NUG4 571 aaPredicted RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 DNAJB12Q9NXW2 375 aaKnown RBP7.45□□□□□ -1.22
HPS4-207ENST00000459918 KCNN3Q9UGI6 736 aa7.45□□□□□ -1.22
HPS4-207ENST00000459918 SCN3AQ9NY46 2000 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms