RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GOLGA7Q7Z5G4 137 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 EPHX4Q8IUS5 362 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SYT12Q8IV01 421 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ZNF619Q8N2I2 560 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ANKRD53Q8N9V6 530 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR5K2Q8NHB8 316 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 RFWD2Q8NHY2 731 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 UTP15Q8TED0 518 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 PPP4R1Q8TF05 950 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 L3HYPDHQ96EM0 354 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR4K3Q96R72 315 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 MENTQ9BUN1 341 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CD244Q9BZW8 370 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 DRC3Q9H069 523 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ARRDC1-AS1Q9H2J1 176 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 NOL11Q9H8H0 719 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 RDH14Q9HBH5 336 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PTGDR2Q9Y5Y4 395 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 LRP4O75096 1905 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR7A17O14581 309 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SLC16A5O15375 505 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 EDF1O60869 148 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 WDR47O94967 919 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 RPS17P08708 135 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 GNSP15586 552 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 IL10P22301 178 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PIK3CGP48736 1102 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PLOD1Q02809 727 aaPredicted RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 CLCQ05315 142 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 GRIK2Q13002 908 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 RCN2Q14257 317 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PPA1Q15181 289 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 HLA-BQ31612 363 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 TCHHL1Q5QJ38 904 aaPredicted RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 SULT1C3Q6IMI6 304 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 BNC2Q6ZN30 1099 aaPredicted RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 FRMD7Q6ZUT3 714 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SYVN1Q86TM6 617 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SLC22A9Q8IVM8 553 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 LINC01555Q8NAE3 123 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR4E2Q8NGC2 313 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 OR9A1PQ8NGU1 263 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SLC37A2Q8TED4 501 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SGK3Q96BR1 496 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 GSDMCQ9BYG8 508 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 TRIM54Q9BYV2 358 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 EPN3Q9H201 632 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 TRIT1Q9H3H1 467 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 ALG2Q9H553 416 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 NPHS2Q9NP85 383 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 VTI1BQ9UEU0 232 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 MID2Q9UJV3 735 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CFL2Q9Y281 166 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ARHGAP10A1A4S6 786 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 HAT1O14929 419 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 HGSO14964 777 aaPredicted RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 AQP9O43315 295 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 NRP2O60462 931 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 PIAS2O75928 621 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 HNRNPH1P31943 449 aaKnown RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 ARL1P40616 181 aaPredicted RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 BLKP51451 505 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 CUL3Q13618 768 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 RBBP7Q16576 425 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 MAJINQ3KP22 176 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 TRIM61Q5EBN2 209 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 AADACL4Q5VUY2 407 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 ATG16L1Q676U5 607 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 ANKS6Q68DC2 871 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 SCIMPQ6UWF3 145 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 RGS9BPQ6ZS82 235 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 MAVSQ7Z434 540 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 RAB44Q7Z6P3 723 aaPredicted RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 DCP2Q8IU60 420 aaKnown RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 DCUN1D3Q8IWE4 304 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 CCDC138Q96M89 665 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 NR1H4Q96RI1 486 aaPredicted RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 HBEGFQ99075 208 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 SARGQ9BW04 601 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 IPPKQ9H8X2 491 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 MID1IP1Q9NPA3 183 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 THAP1Q9NVV9 213 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 SPHK1Q9NYA1 384 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 MALT1Q9UDY8 824 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 ICKQ9UPZ9 632 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.82
USP39-210ENST00000459775 PCDHGB7Q9Y5F8 929 aa9.96□□□□□ -0.82
USP39-210ENST00000459775 ZFC3H1O60293 1989 aaKnown RBP9.95□□□□□ -0.82
USP39-210ENST00000459775 OR6C65A6NJZ3 312 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 E7ENX8 843 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 STX16-NPEPL1H3BU86 382 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 MASP2O00187 686 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 STX16O14662 325 aa9.95□□□□□ -0.82
USP39-210ENST00000459775 KLF11O14901 512 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms