RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PDLIM5Q96HC4 596 aaKnown RBP17.82■□□□□ 0.44
USP39-209ENST00000458268 ZNF285Q96NJ3 590 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 HAUS8Q9BT25 410 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 SGPP1Q9BX95 441 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 SLC25A18Q9H1K4 315 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 ADNPQ9H2P0 1102 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 CDC42EP4Q9H3Q1 356 aaKnown RBP17.82■□□□□ 0.44
USP39-209ENST00000458268 POPDC3Q9HBV1 291 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 FITM1A5D6W6 292 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 KLF7O75840 302 aaPredicted RBP17.81■□□□□ 0.44
USP39-209ENST00000458268 C1QAP02745 245 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 GCGRP47871 477 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 PMS2P54278 862 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 RAB10P61026 200 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 RPS15AP62244 130 aaKnown RBP17.81■□□□□ 0.44
USP39-209ENST00000458268 PPP1R3AQ16821 1122 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 CEP128Q6ZU80 1094 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 COX15Q7KZN9 410 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 TMPRSS11BQ86T26 416 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 OR2Y1Q8NGV0 311 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 OR2A5Q96R48 311 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 MCMBPQ9BTE3 642 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 ING2Q9H160 280 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 WWOXQ9NZC7 414 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 CD274Q9NZQ7 290 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 NOVA2Q9UNW9 492 aaKnown RBP17.81■□□□□ 0.44
USP39-209ENST00000458268 TP53TG5Q9Y2B4 290 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 OARD1Q9Y530 152 aa17.81■□□□□ 0.44
USP39-209ENST00000458268 MED13Q9UHV7 2174 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 A0A0A6YYC8 382 aaPredicted RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 PYCARD-AS1I3L0S3 204 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 I3L1I5 382 aaPredicted RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 MASP2O00187 686 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 PEX12O00623 359 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 OR1F1O43749 312 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 SLC28A2O43868 658 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 WDR47O94967 919 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 S100BP04271 92 aaPredicted RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 NPPBP16860 134 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 HRH2P25021 359 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 BCL6P41182 706 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 CCR8P51685 355 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 OCA2Q04671 838 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 ILF2Q12905 390 aaKnown RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 NAB1Q13506 487 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 ZXDCQ2QGD7 858 aaPredicted RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 PRTGQ2VWP7 1150 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 CATSPEREQ5SY80 951 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 MROH9Q5TGP6 573 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 MRPL14Q6P1L8 145 aaKnown RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 OVCH1Q7RTY7 1134 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 MRGPREQ86SM8 312 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 TBC1D1Q86TI0 1168 aaPredicted RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 THOC6Q86W42 341 aaKnown RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 GPSM1Q86YR5 675 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 OR56A3Q8NH54 315 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 ADAMTS17Q8TE56 1095 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 OR4K3Q96R72 315 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 DERL2Q9GZP9 239 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 TRPC4Q9UBN4 977 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 RNF112Q9ULX5 631 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 NFU1Q9UMS0 254 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 SLC22A14Q9Y267 594 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 MRPS2Q9Y399 296 aaKnown RBP17.8■□□□□ 0.44
USP39-209ENST00000458268 COL6A6A6NMZ7 2263 aa17.8■□□□□ 0.44
USP39-209ENST00000458268 ALOX12BO75342 701 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 RECKO95980 971 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 CD63P08962 238 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 CD1DP15813 335 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 GDF5P43026 501 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 SSPNQ14714 243 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 RBBP7Q16576 425 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 NKG7Q16617 165 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 NDUFA9Q16795 377 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 LACTB2Q53H82 288 aaPredicted RBP17.79■□□□□ 0.44
USP39-209ENST00000458268 CYS1Q717R9 158 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 SLC5A11Q8WWX8 675 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 NEIL2Q969S2 332 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 FKBP10Q96AY3 582 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 PTERQ96BW5 349 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 CYTH2Q99418 400 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 DRC3Q9H069 523 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 CDC14AQ9UNH5 594 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 PCSK5Q92824 1860 aa17.79■□□□□ 0.44
USP39-209ENST00000458268 SUPT3HB4E1H0 165 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 B8ZZF3 427 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 POC1B-GALNT4F8VUJ3 575 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 K7EM74 188 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 TXNDC9O14530 226 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 LCMT2O60294 686 aaKnown RBP17.78■□□□□ 0.44
USP39-209ENST00000458268 SUPT3HO75486 399 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 UMODP07911 640 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 IL1RNP18510 177 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 MAT1AQ00266 395 aaKnown RBP17.78■□□□□ 0.44
USP39-209ENST00000458268 IRF9Q00978 393 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 RBBP5Q15291 538 aaKnown RBP17.78■□□□□ 0.44
USP39-209ENST00000458268 TGFBIQ15582 683 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 OR4D1Q15615 310 aa17.78■□□□□ 0.44
USP39-209ENST00000458268 SYT16Q17RD7 645 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms