RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 HSMCR30P0CW71 290 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 POLR2EP19388 210 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CHRNA5P30532 468 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PKLRP30613 574 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 UGT2B10P36537 528 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PRIM2P49643 509 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MVDP53602 400 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GAS1P54826 345 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NPRL3Q12980 569 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TRPC3Q13507 836 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CAMK2DQ13557 499 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ARMCX4Q5H9R4 360 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SFRP5Q5T4F7 317 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 STPG1Q5TH74 334 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HECTD2Q5U5R9 776 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ZFAND4Q86XD8 727 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CALHM3Q86XJ0 350 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RDH10Q8IZV5 341 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CLDN19Q8N6F1 224 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 KLHDC9Q8NEP7 349 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ITFG1Q8TB96 612 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GTF3C2Q8WUA4 911 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ATOH1Q92858 354 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TMCO6Q96DC7 493 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OMA1Q96E52 524 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNJ15Q99712 375 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GPA33Q99795 319 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 EFHD1Q9BUP0 239 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 FRMD8P1Q9BZ68 369 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RIBC2Q9H4K1 309 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TM9SF3Q9HD45 589 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RNF146Q9NTX7 359 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM105AQ9NUU6 356 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 EIF2B4Q9UI10 523 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MRPL11Q9Y3B7 192 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RIF1Q5UIP0 2472 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CNOT1A5YKK6 2376 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NBNO60934 754 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NIPSNAP2O75323 286 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ERN1O75460 977 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 EPN2O95208 641 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CYP11A1P05108 521 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ITGA2P17301 1181 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ADORA2BP29275 332 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HTR7P34969 479 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OR1E2P47887 323 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CLK1P49759 484 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GMPSP49915 693 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HERVK_113P63132 956 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TAP1Q03518 808 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GRIK2Q13002 908 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TNK1Q13470 666 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CAMK2GQ13555 558 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GTF2H3Q13889 308 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 FCN2Q15485 313 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SPANXN3Q5MJ09 141 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NIPA1Q7RTP0 329 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ADCK1Q86TW2 530 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 KIF18BQ86Y91 864 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 DPP10Q8N608 796 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OR2T12Q8NG77 320 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OR9Q2Q8NGE9 314 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GPR152Q8TDT2 470 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 HHIPQ96QV1 700 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ADAT1Q9BUB4 502 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM121BQ9BXQ6 578 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ERVK-6Q9BXR3 956 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SCPEP1Q9HB40 452 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MTMR11A4FU01 709 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 J3KTA2 159 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CREG1O75629 220 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ATP5A1P25705 553 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MST1P26927 711 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NPY2RP49146 381 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 RPL34P49207 117 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 FCHO2Q0JRZ9 810 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 SLC35F1Q5T1Q4 408 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 DCAF15Q66K64 600 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 METTL2BQ6P1Q9 378 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ZNF852Q6ZMS4 543 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GPAT4Q86UL3 456 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MEX3DQ86XN8 651 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 DMRTC2Q8IXT2 367 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 OR52J3Q8NH60 311 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 BCL7CQ8WUZ0 217 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 VOPP1Q96AW1 172 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 MS4A4AQ96JQ5 239 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 KCNC2Q96PR1 638 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 JAM3Q9BX67 310 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 NSUN3Q9H649 340 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CCDC86Q9H6F5 360 aaKnown RBP4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 CATSPERBQ9H7T0 1116 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 USE1Q9NZ43 259 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 PCTPQ9UKL6 214 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ALG5Q9Y673 324 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms