RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 VWA5B1Q5TIE3 1220 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SLC6A19Q695T7 634 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 JMJD6Q6NYC1 403 aaPredicted RBP9.21□□□□□ -0.94
USP54-207ENST00000451492 PRMT9Q6P2P2 845 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 TMEM207Q6UWW9 146 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 FRA10AC1Q70Z53 315 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SHISA5Q8N114 240 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 CPT1CQ8TCG5 803 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 PYROXD1Q8WU10 500 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 C16orf45Q96MC5 204 aaPredicted RBP9.21□□□□□ -0.94
USP54-207ENST00000451492 TSNARE1Q96NA8 513 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 OR2A5Q96R48 311 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 EGFL8Q99944 293 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 RBCK1Q9BYM8 510 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 DRC3Q9H069 523 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SLC26A1Q9H2B4 701 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 CAB39LQ9H9S4 337 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 ZBTB20Q9HC78 741 aaPredicted RBP9.21□□□□□ -0.94
USP54-207ENST00000451492 ZNF160Q9HCG1 818 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 ATP13A2Q9NQ11 1180 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SLAMF7Q9NQ25 335 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 SMYD2Q9NRG4 433 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 HCN3Q9P1Z3 774 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 RNF14Q9UBS8 474 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 C3orf18Q9UK00 162 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 NXT1Q9UKK6 140 aaKnown RBP9.21□□□□□ -0.94
USP54-207ENST00000451492 CORO1CQ9ULV4 474 aaPredicted RBP9.21□□□□□ -0.94
USP54-207ENST00000451492 VWA7Q9Y334 891 aa9.21□□□□□ -0.94
USP54-207ENST00000451492 FAM187AA6NFU0 413 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 ZNF860A6NHJ4 632 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 NCF1BA6NI72 391 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 NCF1CA8MVU1 366 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 CXorf49A8MYA2 514 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 CDC7O00311 574 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SLC16A5O15375 505 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 PRPF4O43172 522 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP54-207ENST00000451492 FOXS1O43638 330 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 IGHEP01854 428 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 HEXBP07686 556 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 NCF1P14598 390 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 ACPPP15309 386 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 ZNF37AP17032 561 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 BCL6P41182 706 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 AVPR1BP47901 424 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SLC12A2P55011 1212 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 RPS15AP62244 130 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 CSNK1G2P78368 415 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 AIMP2Q13155 320 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 DSG2Q14126 1118 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 MYBPC3Q14896 1274 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 IRAK1BP1Q5VVH5 260 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 CAPN13Q6MZZ7 669 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 KIRREL2Q6UWL6 708 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 LCTLQ6UWM7 567 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 MAATS1Q7Z4T9 603 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 GALNT7Q86SF2 657 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SLC26A11Q86WA9 606 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 ZC3HC1Q86WB0 502 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 ATCAYQ86WG3 371 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SPATA6LQ8N4H0 392 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 AMER2Q8N7J2 671 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 RBMXL3Q8N7X1 1067 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 AMER3Q8N944 861 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 BBOF1Q8ND07 529 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 OR11G2Q8NGC1 345 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 EXT2Q93063 718 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 MIB2Q96AX9 1013 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 THOC3Q96J01 351 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 CNDP1Q96KN2 507 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SMAD5Q99717 465 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 ERP44Q9BS26 406 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 TRIM54Q9BYV2 358 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 ILKAPQ9H0C8 392 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 ZNF552Q9H707 407 aaPredicted RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 GPAMQ9HCL2 828 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 MLXIPLQ9NP71 852 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 TMEM184CQ9NVA4 438 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 GRHL1Q9NZI5 618 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 TXNDC16Q9P2K2 825 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 UTP11Q9Y3A2 253 aaKnown RBP9.2□□□□□ -0.94
USP54-207ENST00000451492 CSAG2Q9Y5P2 127 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 SHANK1Q9Y566 2161 aa9.2□□□□□ -0.94
USP54-207ENST00000451492 NSG1A0A0A6YYJ2 146 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ESYT3A0FGR9 886 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 VSTM2BA6NLU5 285 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 IDSB3KWA1 339 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 E7ESA3 106 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SGK494L7N484 410 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 NDC80O14777 642 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 NDUFS4O43181 175 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 OR1F1O43749 312 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 LCMT2O60294 686 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 VPS4BO75351 444 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 RDH16O75452 317 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 JRKO75564 520 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 SORBS2O94875 1100 aaKnown RBP9.19□□□□□ -0.94
USP54-207ENST00000451492 B3GALT4O96024 378 aa9.19□□□□□ -0.94
USP54-207ENST00000451492 ALPPP05187 535 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms