RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GOLGA7Q7Z5G4 137 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 CCNYL1Q8N7R7 359 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 ABHD11Q8NFV4 315 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 OR6Y1Q8NGX8 325 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 PPP4R1Q8TF05 950 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
VPS33A-202ENST00000451053 MOCOSQ96EN8 888 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 RNF31Q96EP0 1072 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 CHMP6Q96FZ7 201 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 CNDP1Q96KN2 507 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 CTRCQ99895 268 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 C1QTNF3Q9BXJ4 246 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 PELI2Q9HAT8 420 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
VPS33A-202ENST00000451053 FGF21Q9NSA1 209 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 THAP1Q9NVV9 213 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 SLC39A1Q9NY26 324 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 GPRC5BQ9NZH0 403 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 PILRAQ9UKJ1 303 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 STK38LQ9Y2H1 464 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 MSRB2Q9Y3D2 182 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 DCHS1Q96JQ0 3298 aa12.49□□□□□ -0.41
VPS33A-202ENST00000451053 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 A0A0J9YVX5 310 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 FEZF1A0PJY2 475 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 TMEM150CB9EJG8 249 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 CLGNO14967 610 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 SUPT7LO94864 414 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 TNFSF15O95150 251 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 MSL3P1P0C860 447 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 C1GALT1C1LP0DN25 315 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 EZRP15311 586 aaKnown RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 EPB42P16452 691 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 GNAZP19086 355 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 SLC1A6P48664 564 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 NAGLUP54802 743 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ABCE1P61221 599 aaKnown RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 REEP5Q00765 189 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ACY1Q03154 408 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 BST1Q10588 318 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 GTF2H2Q13888 395 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 RCN2Q14257 317 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 FRMPD2BQ6IN97 320 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 GTF2H2CQ6P1K8 395 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 FBXO42Q6P3S6 717 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ERMP1Q7Z2K6 904 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 MCATQ8IVS2 390 aaKnown RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ZNF740Q8NDX6 193 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 OR4K1Q8NGD4 311 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 OR1L3Q8NH93 324 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ZNF483Q8TF39 744 aaPredicted RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 USP7Q93009 1102 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ZFYVE21Q9BQ24 234 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 GATA5Q9BWX5 397 aaPredicted RBP12.48□□□□□ -0.41
VPS33A-202ENST00000451053 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 DRC3Q9H069 523 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 FBXO8Q9NRD0 319 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 PSD3Q9NYI0 1048 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 PLCL2Q9UPR0 1127 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 ANGPTL3Q9Y5C1 460 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 PCDHGA8Q9Y5G5 932 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 SPTBN4Q9H254 2564 aa12.48□□□□□ -0.41
VPS33A-202ENST00000451053 LCMT2O60294 686 aaKnown RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 TIAF1O95411 115 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 HSPA4LO95757 839 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 MLYCDO95822 493 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 FGF5P12034 268 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 TSPAN8P19075 237 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 CD22P20273 847 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 BCL6P41182 706 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 CDH13P55290 713 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 CBX1P83916 185 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 SHC2P98077 582 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 CHIT1Q13231 466 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 COL9A2Q14055 689 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 DOC2AQ14183 400 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 RTP5Q14D33 572 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 ZC3H12BQ5HYM0 836 aaKnown RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 ATG9BQ674R7 924 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 ZCCHC23Q6ZST2 131 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 FRMD7Q6ZUT3 714 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 CRLF3Q8IUI8 442 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 N4BP2L2Q92802 583 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-202ENST00000451053 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 WDR34Q96EX3 536 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 C7orf26Q96N11 449 aa12.47□□□□□ -0.41
VPS33A-202ENST00000451053 ZNF317Q96PQ6 595 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms