RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DCUN1D3Q8IWE4 304 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SYTL1Q8IYJ3 562 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 GPR135Q8IZ08 494 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 STAG3L4Q8TBR4 150 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 ANKRD49Q8WVL7 239 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 APOPT1Q96IL0 206 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SELENOSQ9BQE4 189 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 KCNK9Q9NPC2 374 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 FER1L5A0AVI2 2057 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 SPTA1P02549 2419 aa16.36■□□□□ 0.21
PRPF40A-204ENST00000450303 TNRC6AQ8NDV7 1962 aaKnown RBP16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 FOXO6A8MYZ6 492 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 EBAG9O00559 213 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 NDUFAB1O14561 156 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 RECKO95980 971 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 CAPN1P07384 714 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 HIST1H2AGP0C0S8 130 aaPredicted RBP16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 HIST1H2ADP20671 130 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 MAGP20916 626 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 HNRNPH2P55795 449 aaKnown RBP16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 GUCY1A3Q02108 690 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 CHAF1BQ13112 559 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 SP140Q13342 867 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 UGT8Q16880 541 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 CCDC153Q494R4 210 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 SH2D5Q6ZV89 423 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 FRA10AC1Q70Z53 315 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 PIWIL4Q7Z3Z4 852 aaKnown RBP16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 ADAMTSL2Q86TH1 951 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 CENPLQ8N0S6 344 aaPredicted RBP16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 DNAJC22Q8N4W6 341 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 BANPQ8N9N5 519 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 OR2L8Q8NGY9 312 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 KIAA1191Q96A73 305 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 HIST1H2AHQ96KK5 128 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 HIST1H2AJQ99878 128 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 H2AFJQ9BTM1 129 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 TRIM55Q9BYV6 548 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 IGSF5Q9NSI5 407 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 IRAK4Q9NWZ3 460 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 MID2Q9UJV3 735 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 SNX7Q9UNH6 387 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 TP53TG5Q9Y2B4 290 aa16.35■□□□□ 0.21
PRPF40A-204ENST00000450303 MED13Q9UHV7 2174 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 ARGFXA6NJG6 315 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 SYCE1LA8MT33 242 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 H3BMH7 237 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 SPAG7O75391 227 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 MATN4O95460 622 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 C1orf105O95561 183 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 TSPAN12O95859 305 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 ENO2P09104 434 aaPredicted RBP16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 TFEBP19484 476 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 GRIA3P42263 894 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 CPZQ66K79 652 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 FAM198BQ6UWH4 519 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 UBE2R2Q712K3 238 aaPredicted RBP16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 PLD6Q8N2A8 252 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 SPATA6LQ8N4H0 392 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 ZNF655Q8N720 491 aaPredicted RBP16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 RHEBL1Q8TAI7 183 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 MCOLN3Q8TDD5 553 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 ASB11Q8WXH4 323 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 NLNQ9BYT8 704 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 DHCR7Q9UBM7 475 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 RNF112Q9ULX5 631 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 TENM4Q6N022 2769 aa16.34■□□□□ 0.21
PRPF40A-204ENST00000450303 MKRN2OSH3BPM6 223 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 PRPF4O43172 522 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 PSIP1O75475 530 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 S100BP04271 92 aaPredicted RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 HBQ1P09105 142 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 RAB40ALP0C0E4 278 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 GLRBP48167 497 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 DLG1Q12959 904 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 SLC9A5Q14940 896 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 SF1Q15637 639 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 LACTB2Q53H82 288 aaPredicted RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 MLIPQ5VWP3 458 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 TTC19Q6DKK2 380 aaPredicted RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 RAB42Q8N4Z0 105 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 CCDC63Q8NA47 563 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 RAD51AP1Q96B01 352 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 MRPL57Q9BQC6 102 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 MRPL46Q9H2W6 279 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 PARVBQ9HBI1 364 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 TCFL5Q9UL49 500 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 TMCO1Q9UM00 188 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 PLCL2Q9UPR0 1127 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 PCM1Q15154 2024 aa16.33■□□□□ 0.2
PRPF40A-204ENST00000450303 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 NPEPPSL1A6NEC2 478 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 GFYI3L273 518 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 TM9SF1O15321 606 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 ZWINTO95229 277 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 WISP1O95388 367 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 TAC1P20366 129 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 AGXTP21549 392 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 PSMB5P28074 263 aa16.32■□□□□ 0.2
PRPF40A-204ENST00000450303 CCL11P51671 97 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms