RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SMAD3P84022 425 aaKnown RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 IFITM3Q01628 133 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 USP41Q3LFD5 358 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 WDR45BQ5MNZ6 344 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 IER5LQ5T953 404 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 HIST2H2AA3Q6FI13 130 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 C1orf52Q8N6N3 182 aaKnown RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 GRPEL2Q8TAA5 225 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 GPR151Q8TDV0 419 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 DNASE1L2Q92874 299 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 MED28Q9H204 178 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 MKLN1Q9UL63 735 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 SMIM35A0A1B0GVV1 85 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 SGTAO43765 313 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 SSX4O60224 188 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 PDYNP01213 254 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CSTF2P33240 577 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ISL1P61371 349 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 RPS26P62854 115 aaKnown RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 VLDLRP98155 873 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF45Q02386 682 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ATAD3CQ5T2N8 411 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 OTUD1Q5VV17 481 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 XAF1Q6GPH4 301 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 C11orf88Q6PI97 169 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 LMNTD1Q8N9Z9 388 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 SLC37A3Q8NCC5 494 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 GTF2H4Q92759 462 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 RAB8BQ92930 207 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 COL21A1Q96P44 957 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CLCA2Q9UQC9 943 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 HAS3O00219 553 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CORO1AP31146 461 aaKnown RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 FCGRTP55899 365 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 MEF2AQ02078 507 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 MVKQ03426 396 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CHRNA6Q15825 494 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 PARP15Q460N3 678 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 LCN1P1Q5VSP4 162 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 AGAP6Q5VW22 663 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 TRIM40Q6P9F5 258 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 GLB1L3Q8NCI6 653 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 PAPD5Q8NDF8 572 aaKnown RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 NFKBIDQ8NI38 313 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 AGAP4Q96P64 663 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF382Q96SR6 550 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 UCK2Q9BZX2 261 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CCDC177Q9NQR7 707 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ING4Q9UNL4 249 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 SHROOM3Q8TF72 1996 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 TTC3P53804 2025 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 FAM172BPA6NC97 362 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 DAPP51397 102 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 MRPS6P82932 125 aaKnown RBP12.02□□□□□ -0.48
UBE3B-204ENST00000449510 HSPB3Q12988 150 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 MAD2L1BPQ15013 274 aaPredicted RBP12.02□□□□□ -0.48
UBE3B-204ENST00000449510 NKG7Q16617 165 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF181Q2M3W8 571 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 VMACQ2NL98 169 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 AKIRIN2Q53H80 203 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF691Q5VV52 312 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 SMARCD3Q6STE5 483 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 KDELC1Q6UW63 502 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 TRAPPC5Q8IUR0 188 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 IZUMO1Q8IYV9 350 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 RHEBL1Q8TAI7 183 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 ZNF671Q8TAW3 534 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 RELTQ969Z4 430 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 C8orf48Q96LL4 319 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 OR2B2Q9GZK3 357 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 POLR2J3Q9H1A7 115 aaKnown RBP12.02□□□□□ -0.48
UBE3B-204ENST00000449510 BRD9Q9H8M2 597 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 NTN4Q9HB63 628 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 TM9SF3Q9HD45 589 aa12.02□□□□□ -0.48
UBE3B-204ENST00000449510 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 A0A1W2PQ09 198 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 DLGAP1O14490 977 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 ALDH2P05091 517 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 NR2F1P10589 423 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 PAICSP22234 425 aaKnown RBP12.02□□□□□ -0.49
UBE3B-204ENST00000449510 TNFSF8P32971 234 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 GRSF1Q12849 480 aaKnown RBP eCLIP12.02□□□□□ -0.49
UBE3B-204ENST00000449510 TUSC3Q13454 348 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 TAF1AQ15573 450 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-204ENST00000449510 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 PM20D1Q6GTS8 502 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 ERICH5Q6P6B1 374 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 CCDC28AQ8IWP9 274 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 OR8J3Q8NGG0 315 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 BPIFB1Q8TDL5 484 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 PPCDCQ96CD2 204 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 DHRS1Q96LJ7 313 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms