RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FASTKQ14296 549 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 POLD3Q15054 466 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 OR1C1Q15619 314 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SNRNP35Q16560 246 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 MAN2A1Q16706 1144 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 NKAIN1Q4KMZ8 207 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CNNM4Q6P4Q7 775 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 B3GNT6Q6ZMB0 384 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 RFLNAQ6ZTI6 216 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ESPNLQ6ZVH7 1005 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 OTOAQ7RTW8 1153 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 DAAM2Q86T65 1068 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 KMT5CQ86Y97 462 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SCML4Q8N228 414 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 BANPQ8N9N5 519 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SLC4A11Q8NBS3 891 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 MDS2Q8NDY4 140 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 PROKR1Q8TCW9 393 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ZFAND2BQ8WV99 257 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TEKT4Q8WW24 435 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SMPDL3BQ92485 455 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 NUS1Q96E22 293 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 PIK3IP1Q96FE7 263 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CDK5RAP3Q96JB5 506 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 COQ10AQ96MF6 247 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TNFRSF13CQ96RJ3 184 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CPPED1Q9BRF8 314 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 RAB33BQ9H082 229 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 DEFB127Q9H1M4 99 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 OSGEPL1Q9H4B0 414 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 PRDM13Q9H4Q3 707 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 APOBEC3GQ9HC16 384 aaKnown RBP4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SLC40A1Q9NP59 571 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CNGB3Q9NQW8 809 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 FANCLQ9NW38 375 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 MED29Q9NX70 200 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 ALKBH4Q9NXW9 302 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 DKK2Q9UBU2 259 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 TRIM10Q9UDY6 481 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SLC12A6Q9UHW9 1150 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SERTAD3Q9UJW9 196 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 CHST2Q9Y4C5 530 aa4.64□□□□□ -1.67
SDCBP-205ENST00000447267 SACSQ9NZJ4 4579 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 IGHV4-30-2A0A087WSY4 118 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 OR5K4A6NMS3 321 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 PFKFB2O60825 505 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 NDUFS7O75251 213 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SCAF4O95104 1147 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 GOSR1O95249 250 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TRUB2O95900 331 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SERPINA7P05543 415 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CD63P08962 238 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CLEC2LP0C7M8 214 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SLC2A4P14672 509 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TFEBP19484 476 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 OR1E1P30953 314 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 HOXD13P35453 343 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CYP2J2P51589 502 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 AGFG1P52594 562 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 RAD23BP54727 409 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 MANFP55145 182 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SLC8A3P57103 927 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 VLDLRP98155 873 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 GUCY1B3Q02153 619 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 IHHQ14623 411 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 PTPRRQ15256 657 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TERF2Q15554 542 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 MAPKAPK3Q16644 382 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 NFIL3Q16649 462 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CMPK2Q5EBM0 449 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 AFMIDQ63HM1 303 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 ARHGAP17Q68EM7 881 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TXNRD3NBQ6F5E7 133 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 PMF1Q6P1K2 205 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 RUFY3Q7L099 469 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 PEG10Q86TG7 708 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SETD3Q86TU7 594 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CAMK1DQ8IU85 385 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 PRSS58Q8IYP2 241 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 BEST3Q8N1M1 668 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CDYL2Q8N8U2 506 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 ZNF610Q8N9Z0 462 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 BEND2Q8NDZ0 799 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 RAD54LQ92698 747 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 ARHGEF2Q92974 986 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SCMH1Q96GD3 660 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 C17orf62Q9BQA9 187 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 AP1M1Q9BXS5 423 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 SLCO5A1Q9H2Y9 848 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 FOXP1Q9H334 677 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 FANCEQ9HB96 536 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 KLC4Q9NSK0 619 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TRMT1Q9NXH9 659 aaKnown RBP4.63□□□□□ -1.67
SDCBP-205ENST00000447267 ARL15Q9NXU5 204 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 CD84Q9UIB8 345 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 TSPAN16Q9UKR8 245 aa4.63□□□□□ -1.67
SDCBP-205ENST00000447267 INTUQ9ULD6 942 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms