RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SMG1Q96Q15 3661 aaKnown RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 EIF4E1BA6NMX2 242 aaKnown RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 FFAR3O14843 346 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 GPR42O15529 346 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 LCMT2O60294 686 aaKnown RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 KLF7O75840 302 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 TFEBP19484 476 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 GDF5P43026 501 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 CCR10P46092 362 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 KCNC1P48547 511 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 CDKL1Q00532 357 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 CHAF1BQ13112 559 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 TGFBIQ15582 683 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 YOD1Q5VVQ6 348 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 CPZQ66K79 652 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 MRPL14Q6P1L8 145 aaKnown RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 SHISA6Q6ZSJ9 500 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 THOC6Q86W42 341 aaKnown RBP14.14□□□□□ -0.15
HDAC4-204ENST00000446876 GPSM1Q86YR5 675 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 ADAMTS17Q8TE56 1095 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 KCTD4Q8WVF5 259 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 SLC44A1Q8WWI5 657 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 SLC5A11Q8WWX8 675 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 NEIL2Q969S2 332 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 WBP1Q96G27 269 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 PAFAH2Q99487 392 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 TMEM79Q9BSE2 394 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 ALG9Q9H6U8 611 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 SLC22A14Q9Y267 594 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 MAN2B2Q9Y2E5 1009 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 KCNMB2Q9Y691 235 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 MED13Q9UHV7 2174 aa14.14□□□□□ -0.15
HDAC4-204ENST00000446876 NUP210LQ5VU65 1888 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ARGFXA6NJG6 315 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 POC1B-GALNT4F8VUJ3 575 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 TAPBPO15533 448 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 DNAJB5O75953 348 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 WDR47O94967 919 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ALDOAP04075 364 aaKnown RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 C2P06681 752 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 MYBL2P10244 700 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 HRH2P25021 359 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 CRABP2P29373 138 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 OTX2P32243 289 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 FOLR3P41439 243 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 SLC6A12P48065 614 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 CSRP3P50461 194 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 CCR8P51685 355 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ATP6V0D1P61421 351 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 RPS15AP62244 130 aaKnown RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 RELAQ04206 551 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 MUM1Q2TAK8 710 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 TMPRSS11BQ86T26 416 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 CENPLQ8N0S6 344 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ARHGEF39Q8N4T4 335 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 LSM14AQ8ND56 463 aaKnown RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF740Q8NDX6 193 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 APOBEC4Q8WW27 367 aaKnown RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 KIAA1191Q96A73 305 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 ESAMQ96AP7 390 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 DHRS4Q9BTZ2 278 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 WWOXQ9NZC7 414 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 RNF112Q9ULX5 631 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 PADI2Q9Y2J8 665 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 DYRK1BQ9Y463 629 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 PIEZO2Q9H5I5 2752 aa14.13□□□□□ -0.15
HDAC4-204ENST00000446876 TNRC6AQ8NDV7 1962 aaKnown RBP14.13□□□□□ -0.15
HDAC4-204ENST00000446876 A0A087WUV0 522 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-204ENST00000446876 RECKO95980 971 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 UMODP07911 640 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 INHBAP08476 426 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 LTA4HP09960 611 aaKnown RBP14.12□□□□□ -0.15
HDAC4-204ENST00000446876 VARSP26640 1264 aaKnown RBP14.12□□□□□ -0.15
HDAC4-204ENST00000446876 GLRBP48167 497 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 HSPA7P48741 367 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 SERPINB8P50452 374 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ATP1A4Q13733 1029 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 OVCH1Q7RTY7 1134 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ISCA2Q86U28 154 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 PRSS58Q8IYP2 241 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 SHISA5Q8N114 240 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 MFSD9Q8NBP5 474 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ABHD11Q8NFV4 315 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ZCCHC10Q8TBK6 192 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 DCAKDQ8WVC6 231 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 COL26A1Q96A83 441 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 C17orf62Q9BQA9 187 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 SOX17Q9H6I2 414 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ZNF304Q9HCX3 659 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 CD274Q9NZQ7 290 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ACOT9Q9Y305 439 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 ASB1Q9Y576 335 aa14.12□□□□□ -0.15
HDAC4-204ENST00000446876 A0A087X1B8 175 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 A0A096LPK6 155 aa14.11□□□□□ -0.15
HDAC4-204ENST00000446876 A0A0A6YYC8 382 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-204ENST00000446876 SUPT3HB4E1H0 165 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms