RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 P2RY13Q9BPV8 354 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 BCL7BQ9BQE9 202 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 RERGLQ9H628 205 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 RHCGQ9UBD6 479 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
ERCC3-203ENST00000445889 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CTDSP2O14595 271 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 AP3D1O14617 1153 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 EPN2O95208 641 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 ADRA2AP08913 450 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CXCR4P61073 352 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 DMPKQ09013 629 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CHIT1Q13231 466 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
ERCC3-203ENST00000445889 DOC2BQ14184 412 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 ATP13A5Q4VNC0 1218 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CERS6Q6ZMG9 384 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 TPGS1Q6ZTW0 290 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 FAM217AQ8IXS0 508 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 METTL4Q8N3J2 472 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 SLC5A8Q8N695 610 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 GGHQ92820 318 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 COPS8Q99627 209 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 NIPSNAP1Q9BPW8 284 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 TPT1P8Q9HAU6 139 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 CPNE5Q9HCH3 593 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 FZD4Q9ULV1 537 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 SNX6Q9UNH7 406 aa13.76□□□□□ -0.21
ERCC3-203ENST00000445889 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 PCDH7O60245 1069 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CD9P21926 228 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 S100A5P33763 92 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 BMPR1AP36894 532 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 WNT3P56703 355 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CDH18Q13634 790 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 MRPL58Q14197 206 aaKnown RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 TAF12Q16514 161 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 RSBN1Q5VWQ0 802 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 KLHL17Q6TDP4 642 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF852Q6ZMS4 543 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 LSRQ86X29 649 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 NAGSQ8N159 534 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 OR9Q2Q8NGE9 314 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 GTPBP3Q969Y2 492 aaKnown RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 NDEL1Q9GZM8 345 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 HOXD1Q9GZZ0 328 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 SH3BP4Q9P0V3 963 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CLDN24A6NM45 220 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 NUAK1O60285 661 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CHRM5P08912 532 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 HOXB9P17482 250 aaPredicted RBP13.75□□□□□ -0.21
ERCC3-203ENST00000445889 AMD1P17707 334 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CTSKP43235 329 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 TGM4P49221 684 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 FLT3LGP49771 235 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 B4GALNT1Q00973 533 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 BCL2L1Q07817 233 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 HKDC1Q2TB90 917 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 LINC00299Q6ZSB3 139 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 FAM124AQ86V42 546 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 HS6ST3Q8IZP7 471 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 OR4K1Q8NGD4 311 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 MMP27Q9H306 513 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 CCNB1IP1Q9NPC3 277 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 BOLA1Q9Y3E2 137 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 MICAL3Q7RTP6 2002 aa13.75□□□□□ -0.21
ERCC3-203ENST00000445889 SYN3O14994 580 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CYBAP13498 195 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 POU1F1P28069 291 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 STK19P49842 368 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF157P51786 506 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 GANABQ14697 944 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 DUOXA1Q1HG43 343 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 C17orf99Q6UX52 265 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 GDPD3Q7L5L3 318 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ZNF675Q8TD23 568 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 NELL1Q92832 810 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 EFHD2Q96C19 240 aaPredicted RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 OR5M11Q96RB7 305 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 SP140LQ9H930 580 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 MAN2B2Q9Y2E5 1009 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 GOLGA4Q13439 2230 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 FAM227AF5H4B4 570 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 SAP18O00422 153 aaKnown RBP13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ADAMTS4O75173 837 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 CCNKO75909 580 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 ETHE1O95571 254 aa13.74□□□□□ -0.21
ERCC3-203ENST00000445889 TRBC1P01850 177 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms