RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GRHL3Q8TE85 626 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 FAR1Q8WVX9 515 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 SLC30A3Q99726 388 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 TGIF2Q9GZN2 237 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.19□□□□□ -0.62
TTC28-203ENST00000442232 IARS2Q9NSE4 1012 aaKnown RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 OLAHQ9NV23 265 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 TAS2R13Q9NYV9 303 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 C19orf25Q9UFG5 118 aaPredicted RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 TEKT2Q9UIF3 430 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 FBXO5Q9UKT4 447 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 NTNG1Q9Y2I2 539 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 MRPS2Q9Y399 296 aaKnown RBP11.19□□□□□ -0.62
TTC28-203ENST00000442232 CPAMD8Q8IZJ3 1885 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
TTC28-203ENST00000442232 ZGRF1Q86YA3 2104 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 IGHV1-45A0A0A0MS14 117 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 TRAV17A0A0B4J275 112 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 IGKV1-8A0A0C4DH67 115 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 ZCWPW2A0A1B0GU75 182 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 FFAR3O14843 346 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 GPR42O15529 346 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 BMP10O95393 424 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 C8GP07360 202 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 F7P08709 466 aaPredicted RBP11.18□□□□□ -0.62
TTC28-203ENST00000442232 RNF224P0DH78 156 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 C8orf89P0DMQ9 161 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 PGAM1P18669 254 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 CCND1P24385 295 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 IMPA1P29218 277 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 SLC26A3P40879 764 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 SKIV2L2P42285 1042 aaKnown RBP11.18□□□□□ -0.62
TTC28-203ENST00000442232 FNTAP49354 379 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 TBPL1P62380 186 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 MPP1Q00013 466 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 SP140Q13342 867 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 FAM53BQ14153 422 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 INAQ16352 499 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 HSP90AA5PQ58FG0 334 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 ZNF549Q6P9A3 640 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 PIWIL4Q7Z3Z4 852 aaKnown RBP11.18□□□□□ -0.62
TTC28-203ENST00000442232 C17orf64Q86WR6 236 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 PLD3Q8IV08 490 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 SIRT6Q8N6T7 355 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 CAMKVQ8NCB2 501 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 MS4A14Q96JA4 679 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 CCDC138Q96M89 665 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 OR2A5Q96R48 311 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 AARSD1Q9BTE6 412 aaKnown RBP11.18□□□□□ -0.62
TTC28-203ENST00000442232 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 OSGIN2Q9Y236 505 aa11.18□□□□□ -0.62
TTC28-203ENST00000442232 DIDO1Q9BTC0 2240 aaKnown RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 H0YIG0 161 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 H7BY64 318 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 GFYI3L273 518 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 P2RX6O15547 441 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 FOXS1O43638 330 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 KLHL18O94889 574 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 HAUS5O94927 633 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 TTC4O95801 387 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 CYC1P08574 325 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 HIST1H2AGP0C0S8 130 aaPredicted RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 HIST1H2ADP20671 130 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 SOX11P35716 441 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 MAGEA3P43357 314 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 CRYMQ14894 314 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 CYP1B1Q16678 543 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 MINDY4Q4G0A6 757 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ABHD17BQ5VST6 288 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 RPUSD3Q6P087 351 aaKnown RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 PCGF5Q86SE9 256 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 LAPTM4BQ86VI4 370 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 TBC1D19Q8N5T2 526 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 AMER3Q8N944 861 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 NAT8LQ8N9F0 302 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ALKBH8Q96BT7 664 aaKnown RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 PRAP1Q96NZ9 151 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 BARD1Q99728 777 aaKnown RBP11.17□□□□□ -0.62
TTC28-203ENST00000442232 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 NAT9Q9BTE0 207 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 TUBB6Q9BUF5 446 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ZNF700Q9H0M5 742 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ANKHQ9HCJ1 492 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 ABI3Q9P2A4 366 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 TEX15Q9BXT5 2789 aa11.17□□□□□ -0.62
TTC28-203ENST00000442232 SCN2AQ99250 2005 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 SCN3AQ9NY46 2000 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 A0A1W2PQ72 361 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 E2F3O00716 465 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 LRRTM2O43300 516 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 ZSCAN12O43309 604 aa11.16□□□□□ -0.62
TTC28-203ENST00000442232 NSA2O95478 260 aaKnown RBP11.16□□□□□ -0.62
TTC28-203ENST00000442232 STATHP02808 62 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms