RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 EEF1A2Q05639 463 aaKnown RBP17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 DHX9Q08211 1270 aaKnown RBP17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 Q0VFX4 171 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 MFAP5Q13361 173 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 TLR1Q15399 786 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 ATG9BQ674R7 924 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 SPNS2Q8IVW8 549 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 AMER3Q8N944 861 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 EEF1AKMT1Q8WVE0 214 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 ALKBH8Q96BT7 664 aaKnown RBP17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 TMEM184CQ9NVA4 438 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 RIC8BQ9NVN3 520 aa17.53■□□□□ 0.4
AC004540.1-201ENST00000439120 USP9XQ93008 2570 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 DYTNA2CJ06 578 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 P2RX6O15547 441 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 HIST1H2AGP0C0S8 130 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 COX6A1P12074 109 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 HIST1H2ADP20671 130 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 TSFMP43897 325 aaKnown RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 RPS15AP62244 130 aaKnown RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 ARG2P78540 354 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 SP140Q13342 867 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 FAM53BQ14153 422 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 BBS9Q3SYG4 887 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 CRB2Q5IJ48 1285 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 MFSD4BQ5TF39 518 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 B3GNTL1Q67FW5 361 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 C17orf64Q86WR6 236 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 LRRC56Q8IYG6 542 aaPredicted RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 HIST1H2AHQ96KK5 128 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 LMF1Q96S06 567 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 HIST1H2AJQ99878 128 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 H2AFJQ9BTM1 129 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 TGIF2Q9GZN2 237 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 DDX47Q9H0S4 455 aaKnown RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 SYNPO2LQ9H987 977 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 PARVBQ9HBI1 364 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 MKL2Q9ULH7 1088 aa17.52■□□□□ 0.4
AC004540.1-201ENST00000439120 USP9YO00507 2555 aaPredicted RBP17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 A1L4Q6 167 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 FOXS1O43638 330 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 WFS1O76024 890 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 STATHP02808 62 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 PRR35P0CG20 571 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 TCP1P17987 556 aaKnown RBP17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 CCND1P24385 295 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 GRK3P35626 688 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 AP2B1P63010 937 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 PDAP1Q13442 181 aaKnown RBP17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 SYT16Q17RD7 645 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 FAM180AQ6UWF9 173 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 METTL21AQ8WXB1 218 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 LINGO1Q96FE5 620 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 CERS2Q96G23 380 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 C5orf34Q96MH7 638 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 ADAMTS6Q9UKP5 1117 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 PDE10AQ9Y233 779 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 SLC5A6Q9Y289 635 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 NTNG1Q9Y2I2 539 aa17.51■□□□□ 0.39
AC004540.1-201ENST00000439120 NAV2Q8IVL1 2488 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 IGHV1-45A0A0A0MS14 117 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 SLC16A5O15375 505 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 BANF1O75531 89 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 KLHL18O94889 574 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 SERPINA7P05543 415 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 MAT1AQ00266 395 aaKnown RBP17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 AGTRAPQ6RW13 159 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 PAQR3Q6TCH7 311 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 KIAA0408Q6ZU52 694 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 ZC3H7AQ8IWR0 971 aaKnown RBP17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 PDIK1LQ8N165 341 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 CAMKVQ8NCB2 501 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 ST6GALNAC3Q8NDV1 305 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 OR9A4Q8NGU2 314 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 BRIX1Q8TDN6 353 aaKnown RBP17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 THAP11Q96EK4 314 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 ATG10Q9H0Y0 220 aa17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 UTP20O75691 2785 aaKnown RBP17.5■□□□□ 0.39
AC004540.1-201ENST00000439120 H0YIG0 161 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 BMP10O95393 424 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 C8orf89P0DMQ9 161 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 ICAM2P13598 275 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 CDKN2DP55273 166 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 IL2P60568 153 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 NAE1Q13564 534 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 MINDY4Q4G0A6 757 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 RBM20Q5T481 1227 aaKnown RBP17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 CAPN13Q6MZZ7 669 aaPredicted RBP17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 MBOAT1Q6ZNC8 495 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 RIPOR1Q6ZS17 1223 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 ARHGEF39Q8N4T4 335 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 SIRT6Q8N6T7 355 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 GPATCH11Q8N954 259 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 OR1N1Q8NGS0 311 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 GRHL3Q8TE85 626 aa17.49■□□□□ 0.39
AC004540.1-201ENST00000439120 SLCO2A1Q92959 643 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms