RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 ACAD11Q709F0 780 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 MARVELD2Q8N4S9 558 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 ULK4Q96C45 1275 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 SIGLEC12Q96PQ1 595 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 COPS8Q99627 209 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 FRMD8P1Q9BZ68 369 aaPredicted RBP10.56□□□□□ -0.72
CSTF3-203ENST00000438862 TP63Q9H3D4 680 aaPredicted RBP10.56□□□□□ -0.72
CSTF3-203ENST00000438862 ZNF395Q9H8N7 513 aaPredicted RBP10.56□□□□□ -0.72
CSTF3-203ENST00000438862 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 UBP1Q9NZI7 540 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 LRFN1Q9P244 771 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 FAM153AQ9UHL3 310 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 CRLS1Q9UJA2 301 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 CDC14AQ9UNH5 594 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 L3MBTL1Q9Y468 752 aa10.56□□□□□ -0.72
CSTF3-203ENST00000438862 SCN2AQ99250 2005 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 PRPF4O43172 522 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SUN1O94901 812 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 AP2A1O95782 977 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 RAF1P04049 648 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SP1P08047 785 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 TPBGLP0DKB5 382 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 ZNF24P17028 368 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 FBLP22087 321 aaKnown RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 PEBP1P30086 187 aaKnown RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 PEX19P40855 299 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 GRIA3P42263 894 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 WNT3AP56704 352 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 KLF1Q13351 362 aaPredicted RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 PDK1Q15118 436 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 NOMO1Q15155 1222 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SLC1A5Q15758 541 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 MEP1AQ16819 746 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 WASHC2DQ5SRD0 308 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SPINK14Q6IE38 97 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SLC25A25Q6KCM7 469 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 FIGLAQ6QHK4 219 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 TMEM205Q6UW68 189 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 GALNTL5Q7Z4T8 443 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 FGD2Q7Z6J4 655 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 CD163Q86VB7 1156 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 CCDC50Q8IVM0 306 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 BEST3Q8N1M1 668 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 SLC25A41Q8N5S1 370 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 CPSF7Q8N684 471 aaKnown RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 OR5K2Q8NHB8 316 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 ZUFSPQ96AP4 578 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 OLFM1Q99784 485 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 GPATCH1Q9BRR8 931 aaKnown RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 C14orf105Q9NVL8 296 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 KLHL20Q9Y2M5 609 aa10.55□□□□□ -0.72
CSTF3-203ENST00000438862 TDRKHQ9Y2W6 561 aaKnown RBP10.55□□□□□ -0.72
CSTF3-203ENST00000438862 C2orf81A6NN90 581 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 TARM1B6A8C7 271 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 APOC4-APOC2K7ER74 178 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 LIN7AO14910 233 aaPredicted RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 CEP104O60308 925 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 FKBP9O95302 570 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 APOC2P02655 101 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 ACADLP28330 430 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 PCSK6P29122 969 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 GJC1P36383 396 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 PAFAH1B1P43034 410 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 VSX2P58304 361 aaPredicted RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 PTPRCAPQ14761 206 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 MUM1Q2TAK8 710 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 ARSKQ6UWY0 536 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 PAMR1Q6UXH9 720 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 CDC20BQ86Y33 519 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 SLC13A5Q86YT5 568 aaPredicted RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 CREG2Q8IUH2 290 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 CCDC71Q8IV32 467 aaPredicted RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 ZZZ3Q8IYH5 903 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 DTWD1Q8N5C7 304 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 PHF3Q92576 2039 aaKnown RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 TEKT5Q96M29 485 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 YIPF2Q9BWQ6 316 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 TRPC4Q9UBN4 977 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
CSTF3-203ENST00000438862 GNPTGQ9UJJ9 305 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 HRH3Q9Y5N1 445 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 ATRQ13535 2644 aa10.54□□□□□ -0.72
CSTF3-203ENST00000438862 A0A1B0GTH9 108 aa10.53□□□□□ -0.72
CSTF3-203ENST00000438862 PGRMC1O00264 195 aaKnown RBP10.53□□□□□ -0.72
CSTF3-203ENST00000438862 APOL1O14791 398 aa10.53□□□□□ -0.72
CSTF3-203ENST00000438862 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
CSTF3-203ENST00000438862 CST8O60676 142 aa10.53□□□□□ -0.72
CSTF3-203ENST00000438862 CHRNA4P43681 627 aa10.53□□□□□ -0.72
CSTF3-203ENST00000438862 XIAPP98170 497 aa10.53□□□□□ -0.72
CSTF3-203ENST00000438862 PPP2R2BQ00005 443 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms