RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LMAN1P49257 510 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 STK4Q13043 487 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 TMEM132DQ14C87 1099 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 RAB41Q5JT25 222 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 KRT79Q5XKE5 535 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 C11orf63Q6NUN7 778 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 RPUSD3Q6P087 351 aaKnown RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 C3P1Q6ZMU1 363 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 ZC3H3Q8IXZ2 948 aaKnown RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 THAP8Q8NA92 274 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 CDRT15Q96T59 188 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 ATF6BQ99941 703 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 FAM129AQ9BZQ8 928 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 KLHL4Q9C0H6 718 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 NYXQ9GZU5 481 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 ANKRD2Q9GZV1 360 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 MMP27Q9H306 513 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 SMARCAD1Q9H4L7 1026 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 ARHGEF38Q9NXL2 777 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 NOL7Q9UMY1 257 aaKnown RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 PTRH2Q9Y3E5 179 aaKnown RBP2.74□□□□□ -1.97
PTPN4-205ENST00000433888 SNX8Q9Y5X2 465 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 R4GN57 208 aa2.74□□□□□ -1.97
PTPN4-205ENST00000433888 FER1L5A0AVI2 2057 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 ENTPD3O75355 529 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 PRDM1O75626 825 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 IGHV2-70P01814 119 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 PRKAR1AP10644 381 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 TRIM21P19474 475 aaKnown RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 NNMTP40261 264 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 SLC15A1P46059 708 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 LYZP61626 148 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 UBXN2AP68543 259 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 MYL7Q01449 175 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 ZNF146Q15072 292 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 GARNL3Q5VVW2 1013 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 RNLSQ5VYX0 342 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 CHMP1BQ7LBR1 199 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 TMEM173Q86WV6 379 aaPredicted RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 SNX32Q86XE0 403 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 MMD2Q8IY49 270 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 CSNK1G2-AS1Q8NCQ2 148 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 OR7A2PQ8NGA2 310 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 OR10G7Q8NGN6 311 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 PTPMT1Q8WUK0 201 aaPredicted RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 SNRNP27Q8WVK2 155 aaKnown RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 SAT2Q96F10 170 aaPredicted RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 CNDP2Q96KP4 475 aaKnown RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 MS4A10Q96PG2 267 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 MAK16Q9BXY0 300 aaKnown RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 PA2G4Q9UQ80 394 aaKnown RBP2.73□□□□□ -1.97
PTPN4-205ENST00000433888 TMEM5Q9Y2B1 443 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 TMED3Q9Y3Q3 217 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 FAM169AQ9Y6X4 670 aa2.73□□□□□ -1.97
PTPN4-205ENST00000433888 UMODL1Q5DID0 1318 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 A0A1W2PQ72 361 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 CTDSP2O14595 271 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 ARPC2O15144 300 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 ADAMDEC1O15204 470 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 DRD3P35462 400 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 DNA2P51530 1060 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 DHODHQ02127 395 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 KLC1Q07866 573 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 GPR33Q49SQ1 333 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 C1orf141Q5JVX7 400 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 REG3GQ6UW15 175 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 ARHGAP22Q7Z5H3 698 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 C11orf42Q8N5U0 333 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 RTL3Q8N8U3 475 aaKnown RBP2.72□□□□□ -1.97
PTPN4-205ENST00000433888 OR6J1Q8NGC5 347 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.72□□□□□ -1.97
PTPN4-205ENST00000433888 ATP6V1E2Q96A05 226 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 PAFAH2Q99487 392 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 DESI2Q9BSY9 194 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 CCDC28BQ9BUN5 200 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 APOL6Q9BWW8 343 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 SUCLA2Q9P2R7 463 aaPredicted RBP2.72□□□□□ -1.97
PTPN4-205ENST00000433888 LNPEPQ9UIQ6 1025 aa2.72□□□□□ -1.97
PTPN4-205ENST00000433888 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 NEMP2A6NFY4 417 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 URADA6NGE7 173 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 DKC1O60832 514 aaKnown RBP eCLIP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 PSMD10O75832 226 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 TSPAN9O75954 239 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 RPN1P04843 607 aaKnown RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 SELEP16581 610 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 IL11P20809 199 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 EDNRAP25101 427 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 MPZP25189 248 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 ELAVL4P26378 380 aaKnown RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 COPB2P35606 906 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 NRIP1P48552 1158 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 MRPL12P52815 198 aaKnown RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 EIF4EBP2Q13542 120 aaPredicted RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 CAMK2DQ13557 499 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 ITGA7Q13683 1181 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 FAM133BQ5BKY9 247 aaKnown RBP2.71□□□□□ -1.98
PTPN4-205ENST00000433888 IGSF11Q5DX21 431 aa2.71□□□□□ -1.98
PTPN4-205ENST00000433888 IL17RELQ6ZVW7 336 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms