RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 CYP4F2P78329 520 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 ZC3H12BQ5HYM0 836 aaKnown RBP14.71□□□□□ -0.05
CNOT9-205ENST00000433439 METTL2BQ6P1Q9 378 aaKnown RBP14.71□□□□□ -0.05
CNOT9-205ENST00000433439 FBXO42Q6P3S6 717 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 TMPRSS7Q7RTY8 843 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 MILR1Q7Z6M3 343 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 MCATQ8IVS2 390 aaKnown RBP14.71□□□□□ -0.05
CNOT9-205ENST00000433439 KRT78Q8N1N4 520 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 D2HGDHQ8N465 521 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 TBC1D19Q8N5T2 526 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 ABHD11Q8NFV4 315 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 PTCD3Q96EY7 689 aaKnown RBP14.71□□□□□ -0.05
CNOT9-205ENST00000433439 CTRCQ99895 268 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 ZFYVE21Q9BQ24 234 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 DRC3Q9H069 523 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 MID1IP1Q9NPA3 183 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 FGF21Q9NSA1 209 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 GEMIN8Q9NWZ8 242 aaKnown RBP14.71□□□□□ -0.05
CNOT9-205ENST00000433439 SATB2Q9UPW6 733 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 RNF11Q9Y3C5 154 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 DMXL1Q9Y485 3027 aa14.71□□□□□ -0.05
CNOT9-205ENST00000433439 HEATR5BQ9P2D3 2071 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 LOC105369274A0A096LPK9 316 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 LOC102723532A0A0G2JNH3 316 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 TMEM150CB9EJG8 249 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FFAR3O14843 346 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 GPR42O15529 346 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 LCMT2O60294 686 aaKnown RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CRCPO75575 148 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CLDN9O95484 217 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 MLYCDO95822 493 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 PCNAP12004 261 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 EZRP15311 586 aaKnown RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 SPINK2P20155 84 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CD22P20273 847 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CXCR2P25025 360 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 BCL6P41182 706 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 VSX2P58304 361 aaPredicted RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 REEP5Q00765 189 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 ACY1Q03154 408 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 TUBB3Q13509 450 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CPSF6Q16630 551 aaKnown RBP eCLIP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 HIST2H2ACQ16777 129 aaPredicted RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 KIF26BQ2KJY2 2108 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 PAGE2BQ5JRK9 111 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FAM219BQ5XKK7 198 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 TTC19Q6DKK2 380 aaPredicted RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 HIST2H2AA3Q6FI13 130 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FRMPD2BQ6IN97 320 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FRMD7Q6ZUT3 714 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 GPRIN3Q6ZVF9 776 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 OR4N4Q8N0Y3 316 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 DNAJC22Q8N4W6 341 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 OR4F6Q8NGB9 312 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 CCT6BQ92526 530 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 LIN37Q96GY3 246 aaPredicted RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 EFCAB11Q9BUY7 163 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FANCEQ9HB96 536 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 STARD5Q9NSY2 213 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 INTS9Q9NV88 658 aaKnown RBP14.7□□□□□ -0.06
CNOT9-205ENST00000433439 SLC39A1Q9NY26 324 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 PLCL2Q9UPR0 1127 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 FIS1Q9Y3D6 152 aa14.7□□□□□ -0.06
CNOT9-205ENST00000433439 PTPRBP23467 1997 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 A0A1B0GTL3 188 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 TRBC2A0A5B9 178 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 PLD2O14939 933 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 SERPINE1P05121 402 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 CHRNGP07510 517 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 CTSBP07858 339 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 ETV5P41161 510 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 ERVPABLB-1P60509 514 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 RPS15AP62244 130 aaKnown RBP14.69□□□□□ -0.06
CNOT9-205ENST00000433439 LCP2Q13094 533 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 TRAF3Q13114 568 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 STX3Q13277 289 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 LAPTM5Q13571 262 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 DDX39BQ13838 428 aaKnown RBP14.69□□□□□ -0.06
CNOT9-205ENST00000433439 SGO1Q5FBB7 561 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 LETMD1Q6P1Q0 360 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 TMIGD1Q6UXZ0 262 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 RNF44Q7L0R7 432 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 SYVN1Q86TM6 617 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 OR4K1Q8NGD4 311 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 WDR36Q8NI36 951 aaKnown RBP14.69□□□□□ -0.06
CNOT9-205ENST00000433439 AGR3Q8TD06 166 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 RERGQ96A58 199 aaPredicted RBP14.69□□□□□ -0.06
CNOT9-205ENST00000433439 MTFMTQ96DP5 389 aaKnown RBP14.69□□□□□ -0.06
CNOT9-205ENST00000433439 CNDP1Q96KN2 507 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 MACROD1Q9BQ69 325 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 APMAPQ9HDC9 416 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 PILRAQ9UKJ1 303 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 KLK13Q9UKR3 277 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 RARRES3Q9UL19 164 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 KLK4Q9Y5K2 254 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 BAHCC1Q9P281 2608 aa14.69□□□□□ -0.06
CNOT9-205ENST00000433439 A0A1W2PNU3 283 aaPredicted RBP14.68□□□□□ -0.06
CNOT9-205ENST00000433439 H0YGG7 62 aa14.68□□□□□ -0.06
CNOT9-205ENST00000433439 NPHS1O60500 1241 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms