RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 DEFB133Q30KQ1 61 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 TMEM198Q66K66 360 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ARL14Q8N4G2 192 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 OR7G3Q8NG95 312 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 JPH3Q8WXH2 748 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CATSPER2Q96P56 530 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 HBEGFQ99075 208 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 AIF1LQ9BQI0 150 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 BRF2Q9HAW0 419 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 MRPS30Q9NP92 439 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CUEDC1Q9NWM3 386 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 UCKL1Q9NWZ5 548 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 SPHK1Q9NYA1 384 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ARMCX1Q9P291 453 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ENTPD2Q9Y5L3 495 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 HEATR5BQ9P2D3 2071 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CACNA1GO43497 2377 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 C4orf47A7E2U8 309 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ISM1B1AKI9 464 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 BTN3A3O00478 584 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 YKT6O15498 198 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 PEX11AO75192 247 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 RSL1D1O76021 490 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 CMPK1P30085 196 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 MAZP56270 477 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 ERVK-8P63133 956 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 REEP5Q00765 189 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 UBAP2LQ14157 1087 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 NR6A1Q15406 480 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 SHBQ15464 509 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 LACTB2Q53H82 288 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 SGO1Q5FBB7 561 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 C6orf136Q5SQH8 315 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 C6orf132Q5T0Z8 1188 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 UNQ6494/PRO21346Q6UXR6 183 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 GPR156Q8NFN8 814 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 OR2L3Q8NG85 312 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 MTFMTQ96DP5 389 aaKnown RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 TUBB6Q9BUF5 446 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-206ENST00000431390 NT5DC2Q9H857 520 aa17.53■□□□□ 0.4
HMGN1-206ENST00000431390 A0A1B0GTQ1 180 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 LNP1A1A4G5 178 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 FKBP9O95302 570 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 ALDOCP09972 364 aaKnown RBP17.52■□□□□ 0.39
HMGN1-206ENST00000431390 NEK2P51955 445 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 FOXC1Q12948 553 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 BNIP1Q12981 228 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 BNIP3Q12983 259 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 GRIK2Q13002 908 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 SQLEQ14534 574 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 SF1Q15637 639 aaKnown RBP17.52■□□□□ 0.39
HMGN1-206ENST00000431390 GSTA3Q16772 222 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 C14orf28Q4W4Y0 310 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 TMIGD1Q6UXZ0 262 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 SLC25A45Q8N413 288 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 ACPTQ9BZG2 426 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 CAPN10Q9HC96 672 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 TMEM184CQ9NVA4 438 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 ADGRE2Q9UHX3 823 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 ZMIZ1Q9ULJ6 1067 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 COPG1Q9Y678 874 aaKnown RBP17.52■□□□□ 0.39
HMGN1-206ENST00000431390 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.39
HMGN1-206ENST00000431390 OR6C74A6NCV1 312 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 LILRA5A6NI73 299 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 H7BY64 318 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 FOXE1O00358 373 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PCNAP12004 261 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SPINK2P20155 84 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 EPHA8P29322 1005 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SERPINB1P30740 379 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PIK3CBP42338 1070 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 MRPL19P49406 292 aaKnown RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 YBX1P67809 324 aaKnown RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 CSNK1G2P78368 415 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PHEXP78562 749 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 HMGCS1Q01581 520 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 EMX2Q04743 252 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 AP5B1Q2VPB7 878 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SLC23A3Q6PIS1 610 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 HUS1BQ8NHY5 278 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 FLVCR1-AS1Q8TAF5 88 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 METTL2AQ96IZ6 378 aaKnown RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PRAP1Q96NZ9 151 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SPNS1Q9H2V7 528 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 C1orf109Q9NX04 203 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 ACTR10Q9NZ32 417 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PPT2Q9UMR5 302 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SLC6A14Q9UN76 642 aa17.51■□□□□ 0.39
HMGN1-206ENST00000431390 G3BP2Q9UN86 482 aaKnown RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 SNRNP200O75643 2136 aaKnown RBP17.51■□□□□ 0.39
HMGN1-206ENST00000431390 PCDH15Q96QU1 1955 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 IGKV1-8A0A0C4DH67 115 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 C2orf74A8MZ97 194 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 PPM1DO15297 605 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 ATP5HO75947 161 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 CFIP05156 583 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 IDO1P14902 403 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms