RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 DENND2DQ9H6A0 471 aaPredicted RBP14.99□□□□□ -0.01
PTPRF-206ENST00000429895 ANKRA2Q9H9E1 313 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 ITM2CQ9NQX7 267 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 TDP1Q9NUW8 608 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 GNG8Q9UK08 70 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 BAIAP2Q9UQB8 552 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 C2orf92A0A1B0GVN3 265 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 A0A1W2PPL8 197 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 PLOD2O00469 737 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 GDF5P43026 501 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 DPYSL2Q16555 572 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 BRAT1Q6PJG6 821 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 TMEM17Q86X19 198 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 SLITRK4Q8IW52 837 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 MR1Q95460 341 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 EFCAB11Q9BUY7 163 aa14.99□□□□□ -0.01
PTPRF-206ENST00000429895 A0A1W2PQ45 241 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 A0A1W2PQY0 241 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TCRBV7S3A2A0A539 114 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TRBC2A0A5B9 178 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ARPC4P59998 168 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 DNM1P34Q6PK57 102 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 CDKN2AIPNLQ96HQ2 116 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 SUSD3Q96L08 255 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ASPNQ9BXN1 380 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ITM2AO43736 263 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 GP1BBP13224 206 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ANKRD26P1Q6NSI1 321 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 OR10Q1Q8NGQ4 319 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 CEP76Q8TAP6 659 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TFGQ92734 400 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TNFRSF10DQ9UBN6 386 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 CYTH4Q9UIA0 394 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 FAM170BA6NMN3 283 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ARRB1P49407 418 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 BNIP1Q12981 228 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 COL9A2Q14055 689 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 FRG2Q64ET8 278 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 FIP1L1Q6UN15 594 aaKnown RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 FRG2BQ96QU4 278 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 AKTIPQ9H8T0 292 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 MAU2Q9Y6X3 613 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 FHP07954 510 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 SRCP12931 536 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 POLR2CP19387 275 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 GKP32189 559 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 DPY19L1Q2PZI1 675 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 BANPQ8N9N5 519 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 BRI3BPQ8WY22 251 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 PNPLA2Q96AD5 504 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TMEM209Q96SK2 561 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 SERTAD3Q9UJW9 196 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 CYP8B1Q9UNU6 501 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 GLOD5A6NK44 160 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 TMEM233B4DJY2 109 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ZNF670-ZNF695F2Z2N8 137 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 GGT5P36269 586 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 RPS13P62277 151 aaKnown RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 LRRC70Q7Z2Q7 622 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 LRRC57Q8N9N7 239 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 JPH3Q8WXH2 748 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 BARD1Q99728 777 aaKnown RBP14.98□□□□□ -0.01
PTPRF-206ENST00000429895 ST6GALNAC4Q9H4F1 302 aa14.98□□□□□ -0.01
PTPRF-206ENST00000429895 MYOCOSA0A1B0GUC4 107 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 EI24O14681 340 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ITIH1P19827 911 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 SLC2A7Q6PXP3 512 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 SSX6Q7RTT6 188 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 GOLGA7Q7Z5G4 137 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 GPAT4Q86UL3 456 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ZNF565Q8N9K5 539 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 PDPRQ8NCN5 879 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 OR51B5Q9H339 312 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 LOC730098B7Z3J9 87 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 CDC123O75794 336 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 H1F0P07305 194 aaKnown RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 CCNHP51946 323 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ADAM17P78536 824 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 OLIG2Q13516 323 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 SEMA3AQ14563 771 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 RAB39AQ14964 217 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 C12orf40Q86WS4 652 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 EZH1Q92800 747 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ORAI3Q9BRQ5 295 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 TMEM175Q9BSA9 504 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 LRRC3Q9BY71 257 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 FGF18O76093 207 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 TMEM44Q2T9K0 475 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 OGFRL1Q5TC84 451 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 CEACAM20Q6UY09 585 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ZNF516Q92618 1163 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 ZNF599Q96NL3 588 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 CADM1Q9BY67 442 aaKnown RBP14.97□□□□□ -0.01
PTPRF-206ENST00000429895 CFL2Q9Y281 166 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 HSPA12AO43301 675 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 HMGN1P05114 100 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 MATN1P21941 496 aa14.97□□□□□ -0.01
PTPRF-206ENST00000429895 HSD3B2P26439 372 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms