RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ARRDC1-AS1Q9H2J1 176 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 AKIRIN1Q9H9L7 192 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 KCNMB3Q9NPA1 279 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 MRPL17Q9NRX2 175 aaKnown RBP2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 TMEM161AQ9NX61 479 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 CGNQ9P2M7 1197 aaKnown RBP2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 DAPK2Q9UIK4 370 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 NOCTQ9UK39 431 aaKnown RBP2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 NUDCQ9Y266 331 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 DLGAP4Q9Y2H0 992 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 STRAPQ9Y3F4 350 aaKnown RBP2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 JRKLQ9Y4A0 524 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 KLK4Q9Y5K2 254 aa2.74□□□□□ -1.97
HMGB1P9-201ENST00000429856 NOTCH3Q9UM47 2321 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 A0A0B4J203 849 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 C13orf42A0A1B0GVH6 325 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 C2orf92A0A1B0GVN3 265 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 MPHOSPH10O00566 681 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNHIT1O43257 154 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 FGF17O60258 216 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATP9AO75110 1047 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 IGLV2-11P01706 119 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 CRYAAP02489 173 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ATP1A1P05023 1023 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SERPING1P05155 500 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZCCHC18P0CG32 403 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 STAG3L1P0CL83 205 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SAGP10523 405 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 HSPA8P11142 646 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 IL10P22301 178 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SP100P23497 879 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PIK3R1P27986 724 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SFNP31947 248 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 CDX1P47902 265 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TDO2P48775 406 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 FMO5P49326 533 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 HOXA1P49639 335 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TKTL1P51854 596 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 THOP1P52888 689 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SLC26A5P58743 744 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SRP54P61011 504 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 GALK2Q01415 458 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ARL16Q0P5N6 197 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 GTF2H2Q13888 395 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PDE7AQ13946 482 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 NONOQ15233 471 aaKnown RBP eCLIP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TAF7Q15545 349 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 FUT11Q495W5 492 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TAF1BQ53T94 588 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PDSS1Q5T2R2 415 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 STXBP5Q5T5C0 1151 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 GTF2H2CQ6P1K8 395 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 KLC3Q6P597 504 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 WDR88Q6ZMY6 472 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TOM1L2Q6ZVM7 507 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PLEKHM3Q6ZWE6 761 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZNF771Q7L3S4 317 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 ADAMTSL2Q86TH1 951 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 NFE4Q86UQ8 179 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 COMMD2Q86X83 199 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PTOV1Q86YD1 416 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 CPSF7Q8N684 471 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 CCNYQ8ND76 341 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 OR10Q1Q8NGQ4 319 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 EXOC6Q8TAG9 804 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 RNF128Q8TEB7 428 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 N4BP2L2Q92802 583 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PHF21AQ96BD5 680 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 DHX58Q96C10 678 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 PYCR2Q96C36 320 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 MTERF3Q96E29 417 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 C16orf58Q96GQ5 468 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 FAM71F1Q96KD3 344 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 C16orf45Q96MC5 204 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 RASL10BQ96S79 203 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 IWS1Q96ST2 819 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TEX13BQ9BXU2 312 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 EGLN1Q9GZT9 426 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 MMP28Q9H239 520 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 LRMDAQ9H2I8 198 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SNX25Q9H3E2 840 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 TRPC7Q9HCX4 862 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 A4GALTQ9NPC4 353 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 SOHLH2Q9NX45 425 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 HOOK1Q9UJC3 728 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 RALYQ9UKM9 306 aaKnown RBP2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 AURKCQ9UQB9 309 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 EXOC6BQ9Y2D4 811 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 NME7Q9Y5B8 376 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 AP1M2Q9Y6Q5 423 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 KIAA1217Q5T5P2 1943 aa2.73□□□□□ -1.97
HMGB1P9-201ENST00000429856 FAM205AQ6ZU69 1335 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ZCWPW2A0A1B0GU75 182 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 F8VVB4 439 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 F8VWA3 439 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 GAPDHSO14556 408 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 DVL1O14640 695 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 NDC80O14777 642 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 ACSL4O60488 711 aa2.72□□□□□ -1.97
HMGB1P9-201ENST00000429856 LMX1BO60663 402 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms