RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF225Q9UK10 706 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SNX6Q9UNH7 406 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TIMM22Q9Y584 194 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TP53BP1Q12888 1972 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SPTBN4Q9H254 2564 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRBC2A0A5B9 178 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 FEZF1A0PJY2 475 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR2A25A4D2G3 310 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 A8MU76 341 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLCO1B7G3V0H7 640 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 H0YIV9 168 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 MANBAO00462 879 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PIP5K1BO14986 540 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 HDAC3O15379 428 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR1F1O43749 312 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SHOX2O60902 331 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ULK1O75385 1050 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 WFS1O76024 890 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZBTB11O95625 1053 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 C9P02748 559 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 STATHP02808 62 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SERPIND1P05546 499 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 HOXB3P14651 431 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 EZRP15311 586 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SERPINB3P29508 390 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 BCL6P41182 706 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CASP2P42575 452 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SEPHS1P49903 392 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 HTR6P50406 440 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 NEK2P51955 445 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 HK2P52789 917 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 LIMK1P53667 647 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CFHR1Q03591 330 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ILKQ13418 452 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRIP6Q15654 476 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZIC1Q15915 447 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CLPPQ16740 277 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 IMPG1Q17R60 797 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 DEFB110Q30KQ9 67 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ADNP2Q6IQ32 1131 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZNF425Q6IV72 752 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 FIGLAQ6QHK4 219 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SCIMPQ6UWF3 145 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRSS42Q7Z5A4 293 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CPLX4Q7Z7G2 160 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PIP4P1Q86T03 277 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 WDR75Q8IWA0 830 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CLYBLQ8N0X4 340 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CARFQ8N187 725 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR7G3Q8NG95 312 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR4D9Q8NGE8 314 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PIWIL2Q8TC59 973 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 SELENOMQ8WWX9 145 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 N4BP2L2Q92802 583 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 RERGQ96A58 199 aaPredicted RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 MTFMTQ96DP5 389 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 C19orf60Q96EN9 201 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TCTN2Q96GX1 697 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCDC74BQ96LY2 380 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRAPPC9Q96Q05 1148 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 MTERF1Q99551 399 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRIM55Q9BYV6 548 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 RAB33BQ9H082 229 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PFDN4Q9NQP4 134 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 C1GALT1Q9NS00 363 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 TMEM184CQ9NVA4 438 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 IRAK4Q9NWZ3 460 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 VTI1BQ9UEU0 232 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 HAO1Q9UJM8 370 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 CDV3Q9UKY7 258 aaKnown RBP7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PCDHGA11Q9Y5H2 935 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 DNAJC15Q9Y5T4 150 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 PTGDR2Q9Y5Y4 395 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 USH1CQ9Y6N9 552 aa7.59□□□□□ -1.19
HMGA1P4-201ENST00000428643 VPS13AQ96RL7 3174 aa7.59□□□□□ -1.2
HMGA1P4-201ENST00000428643 IGHV5-51A0A0C4DH38 117 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 A0A0G2JND7 137 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 A0A0J9YVX5 310 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 IGHV5-10-1A0A0J9YXX1 117 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 SPAARA0A1B0GVQ0 90 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 TRPC5OSA6NMA1 111 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 AGRPO00253 132 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 PRAMEF10O60809 474 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 DIAPH2O60879 1101 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 CTSVO60911 334 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 JUNP05412 331 aaKnown RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 FGF4P08620 206 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 LINC00032P0C843 101 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 THRAP10827 490 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 DRD4P21917 467 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 SERPINB1P30740 379 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 SCTRP47872 440 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 AQP5P55064 265 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 RPS15AP62244 130 aaKnown RBP7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 HSD11B2P80365 405 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 CBX1P83916 185 aa7.58□□□□□ -1.2
HMGA1P4-201ENST00000428643 PCDH1Q08174 1060 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms